Detailed information NTG1125775

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: EQB67_RS04660
• Genome accession: NZ_LR135782
• Coordinates: 899033..899518 (+)
• Length: 161 a.a.
• NCBI ID: WP_002346391.1
• Uniprot ID: -
• Organism: Enterococcus faecium isolate E4239
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 894033..904518

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQB67_RS04625	-	894887..895228 (+)	342	WP_010726204.1	hypothetical protein	-
EQB67_RS04630	-	895221..895892 (+)	672	WP_010726205.1	DUF1071 domain-containing protein	-
EQB67_RS04635	-	895898..896584 (+)	687	WP_002335864.1	putative HNHc nuclease	-
EQB67_RS13675	-	896588..897283 (+)	696	WP_010723228.1	helix-turn-helix domain-containing protein	-
EQB67_RS04645	-	897273..898511 (+)	1239	WP_002346394.1	DnaB-like helicase C-terminal domain-containing protein	-
EQB67_RS04650	-	898512..898700 (+)	189	WP_002346393.1	hypothetical protein	-
EQB67_RS04655	-	898697..899032 (+)	336	WP_002346392.1	VRR-NUC domain-containing protein	-
EQB67_RS04660	ssbA	899033..899518 (+)	486	WP_002346391.1	single-stranded DNA-binding protein	Machinery gene
EQB67_RS04665	-	899539..899700 (+)	162	WP_025478749.1	hypothetical protein	-
EQB67_RS04670	-	899697..900008 (+)	312	WP_080105880.1	hypothetical protein	-
EQB67_RS04675	-	900002..900292 (+)	291	WP_002311437.1	hypothetical protein	-
EQB67_RS04680	-	900292..900609 (+)	318	WP_002346388.1	DUF1140 family protein	-
EQB67_RS04685	-	900606..900809 (+)	204	WP_002346387.1	hypothetical protein	-
EQB67_RS04690	-	900806..901102 (+)	297	WP_126307885.1	hypothetical protein	-
EQB67_RS04695	-	901179..901595 (+)	417	WP_104775162.1	ArpU family phage packaging/lysis transcriptional regulator	-
EQB67_RS04700	-	901987..902934 (+)	948	WP_104775163.1	Kiwa anti-phage protein KwaB-like domain-containing protein	-
EQB67_RS04705	-	902960..903511 (+)	552	WP_126307888.1	hypothetical protein	-
EQB67_RS13680	-	903583..903813 (+)	231	WP_010725646.1	hypothetical protein	-
EQB67_RS04715	-	903810..904010 (+)	201	WP_002343507.1	hypothetical protein	-
EQB67_RS13930	-	904132..904377 (+)	246	WP_224783914.1	HNH endonuclease signature motif containing protein	-

Sequence

Protein

• Length: 161 a.a.
• Molecular weight: 17839.61 Da
• Isoelectric Point: 7.9972

>NTDB_id=1125775 EQB67_RS04660 WP_002346391.1 899033..899518(+) (ssbA) [Enterococcus faecium isolate E4239]
MINTVTLVGRLTKDPELRTTTSGTGVATFTLAVNRDFKDANGNREADFINCVAWRKTAEILANYAKKGSLIGLIGRIQTR
SYENQQGNRVFVTEVVVERFNLLESRSNNDTSVSNNQTTNYKGNNQNSSNDLSHAQNNQSKNVNSNPFDGSSMNTDLELP
F

Nucleotide

• Length: 486 bp

>NTDB_id=1125775 EQB67_RS04660 WP_002346391.1 899033..899518(+) (ssbA) [Enterococcus faecium isolate E4239]
ATGATTAATACAGTGACTTTAGTAGGAAGATTGACAAAAGACCCAGAGCTTAGAACCACAACAAGTGGAACAGGAGTAGC
GACTTTCACATTAGCAGTAAATCGTGACTTCAAAGATGCGAATGGAAATAGAGAAGCAGACTTTATCAATTGTGTAGCGT
GGAGAAAAACAGCTGAAATTTTAGCAAACTATGCGAAAAAAGGTTCGTTGATTGGATTGATTGGGCGTATTCAAACCAGA
AGCTATGAAAATCAACAAGGAAACCGAGTTTTTGTGACGGAAGTAGTCGTAGAACGCTTCAATCTACTTGAGAGCCGTTC
TAACAACGATACAAGCGTTTCGAACAATCAGACGACAAATTATAAAGGGAACAACCAAAACAGCTCTAACGACTTATCAC
ACGCTCAAAACAATCAATCAAAAAACGTTAATTCCAATCCGTTTGATGGTTCGTCAATGAATACTGATTTAGAACTTCCG
TTTTGA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	50.581	100	0.54
ssb	Latilactobacillus sakei subsp. sakei 23K	51.176	100	0.54
ssbB	Bacillus subtilis subsp. subtilis str. 168	58.491	65.839	0.385
ssbB/cilA	Streptococcus pneumoniae TIGR4	54.206	66.46	0.36
ssbB/cilA	Streptococcus mitis NCTC 12261	54.206	66.46	0.36