Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CJ8421_RS05345 | Genome accession | NZ_CP005388 |
| Coordinates | 1010009..1010311 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni CG8421 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1005009..1015311
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJ8421_RS05320 (CJ8421_05330) | rpsR | 1005372..1005632 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CJ8421_RS05325 (CJ8421_05335) | lon | 1005692..1008067 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| CJ8421_RS05330 (CJ8421_05340) | - | 1008084..1008731 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| CJ8421_RS05335 (CJ8421_05345) | fliW | 1008892..1009281 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CJ8421_RS05340 (CJ8421_05350) | proC | 1009281..1010012 (+) | 732 | WP_002860192.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CJ8421_RS05345 (CJ8421_05355) | ctsT | 1010009..1010311 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| CJ8421_RS05350 (CJ8421_05360) | - | 1010308..1010970 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| CJ8421_RS05355 (CJ8421_05365) | - | 1010967..1011419 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| CJ8421_RS05360 (CJ8421_05370) | hemD | 1011416..1012045 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| CJ8421_RS05365 (CJ8421_05375) | thiE | 1012023..1012655 (-) | 633 | WP_002860194.1 | thiamine phosphate synthase | - |
| CJ8421_RS05370 (CJ8421_05380) | thiD | 1012645..1013457 (-) | 813 | WP_002869542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CJ8421_RS05375 (CJ8421_05385) | - | 1013454..1014140 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| CJ8421_RS05380 (CJ8421_05390) | - | 1014137..1014898 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=112561 CJ8421_RS05345 WP_002853046.1 1010009..1010311(+) (ctsT) [Campylobacter jejuni subsp. jejuni CG8421]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=112561 CJ8421_RS05345 WP_002853046.1 1010009..1010311(+) (ctsT) [Campylobacter jejuni subsp. jejuni CG8421]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTACAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTACAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |