Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | YBT1520_RS11070 | Genome accession | NZ_CP004858 |
| Coordinates | 2068618..2068905 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648325.1 | Uniprot ID | A0A9W5QIM5 |
| Organism | Bacillus thuringiensis serovar kurstaki str. YBT-1520 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2063618..2073905
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YBT1520_RS11050 (YBT1520_10780) | - | 2064789..2064985 (+) | 197 | Protein_2095 | DUF4083 domain-containing protein | - |
| YBT1520_RS11055 (YBT1520_10785) | - | 2065017..2065478 (+) | 462 | WP_000024999.1 | NUDIX hydrolase | - |
| YBT1520_RS11060 (YBT1520_10790) | nadE | 2065528..2066346 (-) | 819 | WP_000174901.1 | ammonia-dependent NAD(+) synthetase | - |
| YBT1520_RS11065 (YBT1520_10795) | - | 2066622..2068502 (+) | 1881 | WP_001026002.1 | ABC transporter permease | - |
| YBT1520_RS11070 (YBT1520_10800) | abrB | 2068618..2068905 (+) | 288 | WP_000648325.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| YBT1520_RS11075 (YBT1520_10805) | - | 2069180..2070127 (+) | 948 | WP_000099756.1 | serine protease | - |
| YBT1520_RS11080 (YBT1520_10810) | - | 2070169..2070477 (-) | 309 | WP_001259906.1 | helix-turn-helix transcriptional regulator | - |
| YBT1520_RS11085 (YBT1520_10815) | - | 2070584..2071519 (+) | 936 | WP_000874082.1 | aldo/keto reductase | - |
| YBT1520_RS11090 (YBT1520_10820) | - | 2071567..2072742 (+) | 1176 | WP_001082497.1 | MFS transporter | - |
| YBT1520_RS37240 (YBT1520_10825) | - | 2072791..2072997 (+) | 207 | WP_001101741.1 | hypothetical protein | - |
| YBT1520_RS11100 (YBT1520_10830) | - | 2073141..2073503 (+) | 363 | WP_001198794.1 | DUF805 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10529.28 Da Isoelectric Point: 5.1367
>NTDB_id=112430 YBT1520_RS11070 WP_000648325.1 2068618..2068905(+) (abrB) [Bacillus thuringiensis serovar kurstaki str. YBT-1520]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSGQNITLANGNITVGIEGAE
YLVKEIEKFLNKSEV
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSGQNITLANGNITVGIEGAE
YLVKEIEKFLNKSEV
Nucleotide
Download Length: 288 bp
>NTDB_id=112430 YBT1520_RS11070 WP_000648325.1 2068618..2068905(+) (abrB) [Bacillus thuringiensis serovar kurstaki str. YBT-1520]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGGGCAGAATATTACATTAGCAAATGGAAATATTACAGTTGGCATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGAAAAGTTTTTAAACAAGAGTGAGGTTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGGGCAGAATATTACATTAGCAAATGGAAATATTACAGTTGGCATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGAAAAGTTTTTAAACAAGAGTGAGGTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
55.556 |
94.737 |
0.526 |