Detailed information NTG1120953

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: EL295_RS29810
• Genome accession: NZ_LR134308
• Coordinates: 6119286..6120350 (+)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain NCTC11445
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6114286..6125350

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL295_RS29800 (NCTC11445_05837)	-	6115257..6116525 (+)	1269	WP_003103278.1	malic enzyme	-
EL295_RS29805 (NCTC11445_05838)	-	6116630..6119101 (-)	2472	WP_003095841.1	penicillin-binding protein 1A	-
EL295_RS29810 (NCTC11445_05839)	pilM	6119286..6120350 (+)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
EL295_RS29815 (NCTC11445_05840)	pilN	6120350..6120946 (+)	597	WP_031671448.1	type 4a pilus biogenesis protein PilN	-
EL295_RS29820 (NCTC11445_05841)	pilO	6120943..6121566 (+)	624	WP_003103268.1	type 4a pilus biogenesis protein PilO	-
EL295_RS29825 (NCTC11445_05842)	pilP	6121563..6122087 (+)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
EL295_RS29830 (NCTC11445_05843)	pilQ	6122141..6124285 (+)	2145	WP_003146401.1	type 4a pilus secretin PilQ	Machinery gene
EL295_RS29835 (NCTC11445_05844)	aroK	6124297..6124815 (+)	519	WP_003095833.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=1120953 EL295_RS29810 WP_003110888.1 6119286..6120350(+) (pilM) [Pseudomonas aeruginosa strain NCTC11445]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1120953 EL295_RS29810 WP_003110888.1 6119286..6120350(+) (pilM) [Pseudomonas aeruginosa strain NCTC11445]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGACTCTCCGCGC
GCAATCCCGAGCGCGTGGACGTACTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466