Detailed information NTG1114749

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABCIP7010_RS04320
• Genome accession: NZ_LN865143
• Coordinates: 918608..919726 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347036.1
• Uniprot ID: A0A009PAD6
• Organism: Acinetobacter baumannii isolate CIP70.10
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 913608..924726

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABCIP7010_RS04290 (ABCIP7010_0868)	-	914438..915286 (+)	849	WP_000336551.1	class II glutamine amidotransferase	-
ABCIP7010_RS04295 (ABCIP7010_0869)	-	915539..915994 (+)	456	WP_000782976.1	bacteriohemerythrin	-
ABCIP7010_RS04300 (ABCIP7010_0870)	-	916147..917214 (+)	1068	WP_002084046.1	hypothetical protein	-
ABCIP7010_RS04305 (ABCIP7010_0871)	-	917214..917537 (+)	324	WP_000442585.1	RnfH family protein	-
ABCIP7010_RS04310 (ABCIP7010_0872)	-	917592..917990 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
ABCIP7010_RS04315 (ABCIP7010_0873)	fur	918102..918539 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
ABCIP7010_RS04320 (ABCIP7010_0874)	pilU	918608..919726 (-)	1119	WP_000347036.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABCIP7010_RS04325 (ABCIP7010_0875)	pilT	919754..920791 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
ABCIP7010_RS04330 (ABCIP7010_0876)	-	920918..921610 (+)	693	WP_031965550.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41905.11 Da
• Isoelectric Point: 6.6944

>NTDB_id=1114749 ABCIP7010_RS04320 WP_000347036.1 918608..919726(-) (pilU) [Acinetobacter baumannii isolate CIP70.10]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=1114749 ABCIP7010_RS04320 WP_000347036.1 918608..919726(-) (pilU) [Acinetobacter baumannii isolate CIP70.10]
ATGGATTTTAATGACCTGCTCAACCTGATGGTTGAAAAGAAATCATCGGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAATGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTATTACATTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTCGTAGGCGCGACAG
GTACAGGTAAATCCACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCACCAGATGTCATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGTCACCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTTGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCACAGCCAGCTTTACATGGATTTGTCACTTAACTTAAAGGCTATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAGGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGAAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.293	98.925	0.685
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.197	93.011	0.392