Detailed information NTG1105550

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACN429_RS20600
• Genome accession: NZ_CP183397
• Coordinates: 4403808..4404872 (-)
• Length: 354 a.a.
• NCBI ID: WP_027598915.1
• Uniprot ID: -
• Organism: Pseudomonas oryzihabitans strain CCSM P719
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4398808..4409872

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN429_RS20575 (ACN429_20575)	aroK	4399278..4399796 (-)	519	WP_007161627.1	shikimate kinase AroK	-
ACN429_RS20580 (ACN429_20580)	pilQ	4399802..4402051 (-)	2250	WP_377709903.1	type IV pilus secretin PilQ	Machinery gene
ACN429_RS20585 (ACN429_20585)	-	4402052..4402570 (-)	519	WP_027602907.1	pilus assembly protein PilP	-
ACN429_RS20590 (ACN429_20590)	pilO	4402567..4403220 (-)	654	WP_007161624.1	type 4a pilus biogenesis protein PilO	-
ACN429_RS20595 (ACN429_20595)	-	4403217..4403807 (-)	591	WP_377709900.1	PilN domain-containing protein	-
ACN429_RS20600 (ACN429_20600)	pilM	4403808..4404872 (-)	1065	WP_027598915.1	pilus assembly protein PilM	Machinery gene
ACN429_RS20605 (ACN429_20605)	-	4405040..4407460 (+)	2421	WP_377709898.1	penicillin-binding protein 1A	-
ACN429_RS20610 (ACN429_20610)	-	4407514..4408782 (-)	1269	WP_027598917.1	malic enzyme-like NAD(P)-binding protein	-
ACN429_RS20615 (ACN429_20615)	-	4408895..4409719 (-)	825	WP_074584070.1	thermonuclease family protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37811.20 Da
• Isoelectric Point: 4.6278

>NTDB_id=1105550 ACN429_RS20600 WP_027598915.1 4403808..4404872(-) (pilM) [Pseudomonas oryzihabitans strain CCSM P719]
MLGLFRKKANTLLGIDVSSTSVKLIELSRAGGRYRVEAYAVEPLPANAVVEKNIAELEGVGLAIGRVLVKARTSARSAAV
AVSGSAVIAKTIEMDAGLTDDELENQIKLEADQYIPYPLDEVAIDFEVQGPSPRNAERVEVLLAACRKENVEVREAALAL
AGVSAKVVDVEAYALERAYQLLANQLGGHVDDLTVAVVDIGATMTTLSVLHNGKTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYQSEVLTPFREAVVQQVARSLQFFFAAGQYNDVDYILLAGGTASISGLDRLIQQKIGTPTVLANP
FADMTVSNKVNAAALAGDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1105550 ACN429_RS20600 WP_027598915.1 4403808..4404872(-) (pilM) [Pseudomonas oryzihabitans strain CCSM P719]
GTGCTAGGGCTATTCAGAAAGAAGGCGAATACGCTGCTGGGTATCGACGTCAGTTCGACATCCGTGAAACTCATCGAGTT
GAGCCGTGCAGGCGGGCGCTACCGGGTGGAGGCCTATGCGGTCGAACCCCTGCCGGCCAATGCCGTGGTCGAGAAGAACA
TCGCCGAACTCGAAGGCGTGGGCCTGGCCATCGGCCGGGTGCTGGTCAAGGCGCGCACCTCCGCGCGCAGCGCTGCCGTG
GCCGTCTCCGGCTCGGCGGTGATCGCCAAGACCATCGAGATGGACGCCGGTCTGACCGACGACGAGCTGGAAAACCAGAT
CAAGCTGGAAGCCGACCAGTACATTCCCTATCCGCTGGACGAGGTCGCCATCGATTTCGAGGTGCAGGGGCCGTCGCCGC
GCAACGCCGAGCGCGTCGAGGTGCTGCTGGCCGCCTGCCGGAAGGAAAACGTCGAGGTCCGCGAAGCGGCCCTGGCGCTG
GCCGGCGTCTCGGCCAAGGTGGTCGACGTCGAGGCCTATGCCCTGGAGCGCGCCTATCAGCTGCTGGCCAATCAGCTCGG
TGGCCACGTCGACGACCTGACCGTGGCGGTGGTCGACATCGGCGCCACCATGACCACCCTGAGCGTGCTGCACAACGGCA
AGACCATCTACACCCGCGAACAGCTGTTTGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGTCGCTATGGCCTGTCGGTG
GAAGAGGCCGGTCTGGCCAAGAAGCAGGGCGGGCTGCCGGACGACTACCAGAGCGAGGTGCTGACGCCCTTCCGCGAGGC
GGTGGTGCAACAGGTGGCGCGTTCGCTGCAGTTCTTTTTCGCCGCCGGGCAATACAATGATGTGGACTACATCTTGCTTG
CTGGAGGAACCGCGTCAATTTCCGGACTCGACCGCTTGATCCAGCAGAAAATCGGCACCCCCACGGTCCTGGCCAATCCC
TTCGCCGACATGACCGTCAGCAACAAGGTCAACGCGGCGGCCCTGGCGGGTGACGCCCCGGCGCTGATGATCGCCTGCGG
CCTGGCCATGAGGAGTTTCGACTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	56.78	100	0.568
comM	Acinetobacter nosocomialis M2	56.78	100	0.568
comM	Acinetobacter baylyi ADP1	55.367	100	0.554
pilM	Legionella pneumophila strain ERS1305867	44.633	100	0.446