Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ACMX8W_RS13505 | Genome accession | NZ_CP180439 |
| Coordinates | 2577173..2578210 (-) | Length | 345 a.a. |
| NCBI ID | WP_047182873.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain Z-294 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2572173..2583210
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMX8W_RS13455 (ACMX8W_13455) | tasA | 2572272..2573057 (-) | 786 | WP_003230183.1 | biofilm matrix protein TasA | - |
| ACMX8W_RS13460 (ACMX8W_13460) | sipW | 2573121..2573693 (-) | 573 | WP_080030740.1 | signal peptidase I SipW | - |
| ACMX8W_RS13465 (ACMX8W_13465) | tapA | 2573677..2574438 (-) | 762 | WP_047182870.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACMX8W_RS13470 (ACMX8W_13470) | yqzG | 2574708..2575034 (+) | 327 | WP_047183570.1 | YqzG/YhdC family protein | - |
| ACMX8W_RS13475 (ACMX8W_13475) | spoIITA | 2575076..2575255 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| ACMX8W_RS13480 (ACMX8W_13480) | comGG | 2575327..2575701 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| ACMX8W_RS13485 (ACMX8W_13485) | comGF | 2575702..2576085 (-) | 384 | WP_015384087.1 | ComG operon protein ComGF | Machinery gene |
| ACMX8W_RS13490 (ACMX8W_13490) | comGE | 2576111..2576458 (-) | 348 | WP_047182872.1 | ComG operon protein 5 | Machinery gene |
| ACMX8W_RS13495 (ACMX8W_13495) | comGD | 2576442..2576873 (-) | 432 | WP_015384089.1 | comG operon protein ComGD | Machinery gene |
| ACMX8W_RS13500 (ACMX8W_13500) | comGC | 2576863..2577159 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| ACMX8W_RS13505 (ACMX8W_13505) | comGB | 2577173..2578210 (-) | 1038 | WP_047182873.1 | comG operon protein ComGB | Machinery gene |
| ACMX8W_RS13510 (ACMX8W_13510) | comGA | 2578197..2579267 (-) | 1071 | WP_015483431.1 | competence protein ComGA | Machinery gene |
| ACMX8W_RS13515 (ACMX8W_13515) | corA | 2579677..2580630 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| ACMX8W_RS13520 (ACMX8W_13520) | yqhB | 2580773..2582101 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| ACMX8W_RS13525 (ACMX8W_13525) | rsbRD | 2582154..2582990 (-) | 837 | WP_015384093.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39738.15 Da Isoelectric Point: 9.6257
>NTDB_id=1095885 ACMX8W_RS13505 WP_047182873.1 2577173..2578210(-) (comGB) [Bacillus subtilis strain Z-294]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQSDQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLIGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYEVDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQSDQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLIGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYEVDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1095885 ACMX8W_RS13505 WP_047182873.1 2577173..2578210(-) (comGB) [Bacillus subtilis strain Z-294]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTTGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCTGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCCGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGTCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATTTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGTTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGATTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCGGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAGTTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGTCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTTGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCTGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCCGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGTCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATTTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGTTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGATTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCGGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAGTTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGTCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
97.214 |
93.623 |
0.91 |