Detailed information NTG1095477

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACMX2G_RS07200
• Genome accession: NZ_CP180375
• Coordinates: 1411399..1412544 (+)
• Length: 381 a.a.
• NCBI ID: WP_024085922.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain NJN-6
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1406399..1417544

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMX2G_RS07180 (ACMX2G_07180)	-	1406874..1407590 (-)	717	WP_014306017.1	Crp/Fnr family transcriptional regulator	-
ACMX2G_RS07185 (ACMX2G_07185)	narK	1407688..1408878 (-)	1191	WP_003151073.1	nitrate transporter NarK	-
ACMX2G_RS07190 (ACMX2G_07190)	argS	1409012..1410682 (-)	1671	WP_003151071.1	arginine--tRNA ligase	-
ACMX2G_RS07195 (ACMX2G_07195)	-	1410679..1411107 (-)	429	WP_003151069.1	DUF1934 domain-containing protein	-
ACMX2G_RS07200 (ACMX2G_07200)	rapF	1411399..1412544 (+)	1146	WP_024085922.1	Rap family tetratricopeptide repeat protein	Regulator
ACMX2G_RS07205 (ACMX2G_07205)	-	1412528..1412647 (+)	120	WP_131242041.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
ACMX2G_RS07210 (ACMX2G_07210)	speB	1412770..1413207 (-)	438	Protein_1409	agmatinase	-
ACMX2G_RS07215 (ACMX2G_07215)	-	1413369..1414796 (-)	1428	WP_046341451.1	DUF885 family protein	-
ACMX2G_RS07220 (ACMX2G_07220)	-	1414797..1416137 (-)	1341	WP_025853604.1	MATE family efflux transporter	-
ACMX2G_RS07225 (ACMX2G_07225)	-	1416134..1417189 (-)	1056	WP_046341452.1	SagB/ThcOx family dehydrogenase	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45768.27 Da
• Isoelectric Point: 5.0694

>NTDB_id=1095477 ACMX2G_RS07200 WP_024085922.1 1411399..1412544(+) (rapF) [Bacillus velezensis strain NJN-6]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1095477 ACMX2G_RS07200 WP_024085922.1 1411399..1412544(+) (rapF) [Bacillus velezensis strain NJN-6]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGATGACCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTACGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACGCAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533