Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACK2VP_RS01630 | Genome accession | NZ_CP176700 |
| Coordinates | 352118..352642 (+) | Length | 174 a.a. |
| NCBI ID | WP_003826621.1 | Uniprot ID | A0A5B0T4S2 |
| Organism | Citrobacter braakii strain GTVSS-028 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 347118..357642
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK2VP_RS01615 (ACK2VP_01615) | aphA | 347753..348466 (+) | 714 | WP_153689820.1 | acid phosphatase AphA | - |
| ACK2VP_RS01620 (ACK2VP_01620) | - | 348593..348949 (+) | 357 | WP_016155357.1 | MmcQ/YjbR family DNA-binding protein | - |
| ACK2VP_RS01625 (ACK2VP_01625) | uvrA | 349044..351866 (-) | 2823 | WP_016155358.1 | excinuclease ABC subunit UvrA | - |
| ACK2VP_RS01630 (ACK2VP_01630) | ssb | 352118..352642 (+) | 525 | WP_003826621.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| ACK2VP_RS01635 (ACK2VP_01635) | - | 352709..352990 (-) | 282 | WP_016155360.1 | YjcB family protein | - |
| ACK2VP_RS01640 (ACK2VP_01640) | - | 353542..355127 (+) | 1586 | Protein_299 | EAL domain-containing protein | - |
| ACK2VP_RS01645 (ACK2VP_01645) | soxS | 355130..355453 (-) | 324 | WP_016155362.1 | superoxide response transcriptional regulator SoxS | - |
| ACK2VP_RS01650 (ACK2VP_01650) | soxR | 355540..355998 (+) | 459 | WP_016155363.1 | redox-sensitive transcriptional activator SoxR | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18621.66 Da Isoelectric Point: 5.2456
>NTDB_id=1082464 ACK2VP_RS01630 WP_003826621.1 352118..352642(+) (ssb) [Citrobacter braakii strain GTVSS-028]
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGVEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQSAPAAP
SNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGVEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQSAPAAP
SNEPPMDFDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=1082464 ACK2VP_RS01630 WP_003826621.1 352118..352642(+) (ssb) [Citrobacter braakii strain GTVSS-028]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAAATGAAAGAGCAGACTG
AATGGCACCGTGTGGTGCTGTTCGGCAAACTGGCGGAAGTTGCCAGCGAATATCTGCGTAAAGGTTCCCAGGTCTATATC
GAAGGTCAGCTGCGTACCCGCAAATGGACCGATCAATCCGGCGTAGAAAAGTACACCACTGAAGTTGTGGTTAACGTTGG
CGGCACCATGCAAATGCTGGGCGGTCGTCAGGGTGGTGGTGCTCCGGCAGGTGGCGGCCAGCAGCAGGGTGGTTGGGGTC
AGCCTCAGCAGCCGCAAGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGTCGGCTCCGGCAGCGCCG
TCTAATGAGCCGCCGATGGATTTCGACGACGATATTCCGTTCTAA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAAATGAAAGAGCAGACTG
AATGGCACCGTGTGGTGCTGTTCGGCAAACTGGCGGAAGTTGCCAGCGAATATCTGCGTAAAGGTTCCCAGGTCTATATC
GAAGGTCAGCTGCGTACCCGCAAATGGACCGATCAATCCGGCGTAGAAAAGTACACCACTGAAGTTGTGGTTAACGTTGG
CGGCACCATGCAAATGCTGGGCGGTCGTCAGGGTGGTGGTGCTCCGGCAGGTGGCGGCCAGCAGCAGGGTGGTTGGGGTC
AGCCTCAGCAGCCGCAAGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGTCGGCTCCGGCAGCGCCG
TCTAATGAGCCGCCGATGGATTTCGACGACGATATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
73.889 |
100 |
0.764 |
| ssb | Glaesserella parasuis strain SC1401 |
56.831 |
100 |
0.598 |
| ssb | Neisseria meningitidis MC58 |
48.603 |
100 |
0.5 |
| ssb | Neisseria gonorrhoeae MS11 |
48.603 |
100 |
0.5 |