Detailed information
Bioinformatically predicted
Overview
| Name | ruvB | Type | Machinery gene |
| Locus tag | BSUA_RS15015 | Genome accession | NZ_CP007800 |
| Coordinates | 2807916..2808920 (-) | Length | 334 a.a. |
| NCBI ID | WP_003229718.1 | Uniprot ID | O32055 |
| Organism | Bacillus subtilis subsp. subtilis str. JH642 substr. AG174 strain JH642 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2802916..2813920
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSUA_RS14985 (BSUA_02952) | yrbG | 2803890..2804546 (-) | 657 | WP_004398801.1 | DUF421 domain-containing protein | - |
| BSUA_RS14990 (BSUA_02953) | - | 2804744..2805133 (+) | 390 | WP_004398667.1 | TIGR04086 family membrane protein | - |
| BSUA_RS14995 (BSUA_02954) | yajC | 2805190..2805456 (-) | 267 | WP_004398708.1 | preprotein translocase subunit YajC | - |
| BSUA_RS15000 (BSUA_02955) | tgt | 2805493..2806638 (-) | 1146 | WP_003229725.1 | tRNA guanosine(34) transglycosylase Tgt | - |
| BSUA_RS15005 (BSUA_02956) | queA | 2806665..2807693 (-) | 1029 | WP_003229723.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| BSUA_RS15010 (BSUA_02957) | yrzS | 2807723..2807923 (-) | 201 | WP_003222669.1 | DUF2905 domain-containing protein | - |
| BSUA_RS15015 (BSUA_02958) | ruvB | 2807916..2808920 (-) | 1005 | WP_003229718.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| BSUA_RS15020 (BSUA_02959) | ruvA | 2808931..2809536 (-) | 606 | WP_003229717.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| BSUA_RS15025 (BSUA_02960) | bofC | 2809675..2810187 (-) | 513 | WP_003229715.1 | sporulation cell-cell signaling protein BofC | - |
| BSUA_RS15030 (BSUA_02961) | csbX | 2810235..2811542 (-) | 1308 | WP_003246197.1 | MFS transporter | - |
| BSUA_RS15035 (BSUA_02962) | iolG | 2811613..2812638 (-) | 1026 | WP_004398990.1 | inositol 2-dehydrogenase | - |
| BSUA_RS15040 (BSUA_02963) | yrzF | 2812876..2813523 (+) | 648 | WP_003246159.1 | phosphotransferase | - |
| BSUA_RS22900 (BSUA_02964) | - | 2813569..2813691 (-) | 123 | WP_003229707.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 334 a.a. Molecular weight: 37467.78 Da Isoelectric Point: 5.1631
>NTDB_id=107972 BSUA_RS15015 WP_003229718.1 2807916..2808920(-) (ruvB) [Bacillus subtilis subsp. subtilis str. JH642 substr. AG174 strain JH642]
MDERLVSSEADNHESVIEQSLRPQNLAQYIGQHKVKENLRVFIDAAKMRQETLDHVLLYGPPGLGKTTLASIVANEMGVE
LRTTSGPAIERPGDLAAILTALEPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATT
RVGLLTAPLRDRFGVMSRLEYYTQEELADIVTRTADVFEVEIDKPSALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRI
TEDISQNALERLQVDRLGLDHIDHKLLMGMIEKFNGGPVGLDTISATIGEESHTIEDVYEPYLLQIGFIQRTPRGRIVTP
AVYHHFQMEAPRYD
MDERLVSSEADNHESVIEQSLRPQNLAQYIGQHKVKENLRVFIDAAKMRQETLDHVLLYGPPGLGKTTLASIVANEMGVE
LRTTSGPAIERPGDLAAILTALEPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATT
RVGLLTAPLRDRFGVMSRLEYYTQEELADIVTRTADVFEVEIDKPSALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRI
TEDISQNALERLQVDRLGLDHIDHKLLMGMIEKFNGGPVGLDTISATIGEESHTIEDVYEPYLLQIGFIQRTPRGRIVTP
AVYHHFQMEAPRYD
Nucleotide
Download Length: 1005 bp
>NTDB_id=107972 BSUA_RS15015 WP_003229718.1 2807916..2808920(-) (ruvB) [Bacillus subtilis subsp. subtilis str. JH642 substr. AG174 strain JH642]
ATGGATGAACGGCTCGTCTCAAGTGAAGCAGACAACCATGAATCAGTGATAGAGCAAAGCCTGAGGCCGCAAAATCTGGC
ACAGTATATCGGGCAGCATAAGGTAAAAGAAAATTTGCGCGTGTTTATAGATGCGGCGAAAATGAGACAGGAGACGCTGG
ATCATGTTCTTCTGTACGGGCCGCCCGGACTCGGAAAAACAACGCTTGCTTCGATTGTTGCTAATGAAATGGGAGTGGAA
TTGCGGACGACATCAGGGCCTGCGATTGAAAGGCCTGGTGATTTGGCTGCTATATTAACGGCGCTGGAACCGGGAGATGT
ATTATTTATTGATGAAATACATAGGCTGCACAGATCGATCGAAGAGGTGCTTTATCCTGCAATGGAAGACTTTTGCCTGG
ACATTGTGATTGGCAAAGGCCCATCTGCCCGCTCGGTTCGCCTCGACCTTCCGCCTTTTACGCTGGTGGGAGCCACGACG
AGGGTGGGGCTTTTGACGGCTCCTTTAAGAGACAGATTCGGCGTAATGTCTCGCCTTGAGTACTATACACAAGAAGAACT
GGCGGATATTGTCACAAGAACCGCTGATGTATTCGAGGTTGAGATTGATAAACCGTCGGCTCTTGAAATTGCAAGAAGAT
CGAGAGGGACGCCCCGCGTGGCGAACCGCCTGCTGAGAAGGGTGCGCGATTTCGCCCAAGTGCTGGGTGACAGCAGGATT
ACGGAAGACATTTCTCAGAATGCGCTGGAGCGGCTTCAGGTTGACCGCCTCGGTTTGGATCATATTGATCATAAGCTGCT
GATGGGCATGATCGAAAAATTCAACGGCGGCCCAGTAGGCCTTGATACGATTTCAGCTACCATCGGCGAGGAATCGCATA
CGATTGAAGACGTATATGAACCATATCTGCTGCAAATTGGATTTATACAAAGAACGCCGCGTGGAAGGATCGTGACACCG
GCCGTTTATCATCATTTCCAAATGGAGGCTCCCCGATATGACTGA
ATGGATGAACGGCTCGTCTCAAGTGAAGCAGACAACCATGAATCAGTGATAGAGCAAAGCCTGAGGCCGCAAAATCTGGC
ACAGTATATCGGGCAGCATAAGGTAAAAGAAAATTTGCGCGTGTTTATAGATGCGGCGAAAATGAGACAGGAGACGCTGG
ATCATGTTCTTCTGTACGGGCCGCCCGGACTCGGAAAAACAACGCTTGCTTCGATTGTTGCTAATGAAATGGGAGTGGAA
TTGCGGACGACATCAGGGCCTGCGATTGAAAGGCCTGGTGATTTGGCTGCTATATTAACGGCGCTGGAACCGGGAGATGT
ATTATTTATTGATGAAATACATAGGCTGCACAGATCGATCGAAGAGGTGCTTTATCCTGCAATGGAAGACTTTTGCCTGG
ACATTGTGATTGGCAAAGGCCCATCTGCCCGCTCGGTTCGCCTCGACCTTCCGCCTTTTACGCTGGTGGGAGCCACGACG
AGGGTGGGGCTTTTGACGGCTCCTTTAAGAGACAGATTCGGCGTAATGTCTCGCCTTGAGTACTATACACAAGAAGAACT
GGCGGATATTGTCACAAGAACCGCTGATGTATTCGAGGTTGAGATTGATAAACCGTCGGCTCTTGAAATTGCAAGAAGAT
CGAGAGGGACGCCCCGCGTGGCGAACCGCCTGCTGAGAAGGGTGCGCGATTTCGCCCAAGTGCTGGGTGACAGCAGGATT
ACGGAAGACATTTCTCAGAATGCGCTGGAGCGGCTTCAGGTTGACCGCCTCGGTTTGGATCATATTGATCATAAGCTGCT
GATGGGCATGATCGAAAAATTCAACGGCGGCCCAGTAGGCCTTGATACGATTTCAGCTACCATCGGCGAGGAATCGCATA
CGATTGAAGACGTATATGAACCATATCTGCTGCAAATTGGATTTATACAAAGAACGCCGCGTGGAAGGATCGTGACACCG
GCCGTTTATCATCATTTCCAAATGGAGGCTCCCCGATATGACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| ruvB | Streptococcus pneumoniae TIGR4 |
60.429 |
97.605 |
0.59 |
| ruvB | Streptococcus pneumoniae R6 |
60.429 |
97.605 |
0.59 |
| ruvB | Streptococcus pneumoniae D39 |
60.429 |
97.605 |
0.59 |
| ruvB | Synechocystis sp. PCC 6803 |
57.143 |
98.503 |
0.563 |
| ruvB | Helicobacter pylori 26695 |
52.744 |
98.204 |
0.518 |