Detailed information    

insolico Bioinformatically predicted

Overview


Name   ciaH   Type   Regulator
Locus tag   ACAM22_RS05630 Genome accession   NZ_AP028929
Coordinates   1272644..1273978 (-) Length   444 a.a.
NCBI ID   WP_369606495.1    Uniprot ID   A0AAT9G0X9
Organism   Streptococcus sp. SN-1     
Function   repress competence development; post-transcriptional repression of CSP production (predicted from homology)   
Competence regulation

Genomic Context


Location: 1267644..1278978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS05625 (MASAN616_11070) - 1268887..1272387 (-) 3501 WP_369606494.1 pneumococcal-type histidine triad protein -
  ACAM22_RS05630 (MASAN616_11080) ciaH 1272644..1273978 (-) 1335 WP_369606495.1 two-component system sensor histidine kinase CiaH Regulator
  ACAM22_RS05635 (MASAN616_11090) ciaR 1273968..1274642 (-) 675 WP_369606496.1 two-component system response regulator CiaR Regulator
  ACAM22_RS05640 (MASAN616_11100) - 1274857..1277403 (-) 2547 WP_369606497.1 M1 family metallopeptidase -
  ACAM22_RS05645 (MASAN616_11110) - 1277524..1277964 (-) 441 WP_261050081.1 ASCH domain-containing protein -
  ACAM22_RS05650 (MASAN616_11120) - 1277906..1278808 (-) 903 WP_261050412.1 putative PEP-binding protein -
  ACAM22_RS05655 (MASAN616_11130) - 1278786..1278926 (-) 141 Protein_1121 NUDIX hydrolase -

Sequence


Protein


Download         Length: 444 a.a.        Molecular weight: 50748.47 Da        Isoelectric Point: 9.1616

>NTDB_id=107330 ACAM22_RS05630 WP_369606495.1 1272644..1273978(-) (ciaH) [Streptococcus sp. SN-1]
MFSKLKKTWYADDFSYFIRNFGVFTLIFSTMTLIILQVMHSSLYTSVDDKLHGLSENPQAVIQLAVNRATEEIKDLENAA
TDTSKTEVKPNVSSNTEVILFDKNFTQLLSGNRFLGLDKIKLEKKELGHIYQIQVFNSYGQEEIYRMILMETNISSVSTN
IKYAAILINTSQLEQASQKHEKLIVIVMTSFWILSLLASLYLARVSVRPLLESMQKQQSFVENASHELRTPLAVLQNRLE
TLFRKPEATIMDVSESIASSLEEVRNMRFLTTNLLNLARRDDGIKPELAEVPTSFFNTTFTNYEMIASENDRVFRFENRI
HRTIVTDQLLLKQLMTILFDNAVKYTEEDGEIDFLISATDRNLYLLVSDNGVGISTEDKKKIFDRFYRVDKARTRQKGGF
GLGLSLAKQIVDALKGTITVKDNKPKGTIFEVKIAIHTPSKKKK

Nucleotide


Download         Length: 1335 bp        

>NTDB_id=107330 ACAM22_RS05630 WP_369606495.1 1272644..1273978(-) (ciaH) [Streptococcus sp. SN-1]
ATGTTCAGTAAACTAAAAAAAACATGGTATGCGGATGACTTTAGTTACTTTATTCGCAACTTCGGTGTCTTCACTCTGAT
TTTCTCCACCATGACCTTGATTATTTTACAGGTCATGCATTCGAGTCTTTATACTTCGGTGGATGATAAGCTTCATGGAC
TGAGTGAAAATCCTCAGGCAGTTATTCAGCTGGCAGTGAATAGGGCAACAGAAGAGATTAAAGATTTAGAGAATGCTGCC
ACAGATACTAGCAAGACTGAGGTGAAACCCAATGTCAGTTCTAACACAGAAGTCATTCTTTTTGATAAAAATTTTACCCA
ACTCCTTTCTGGAAATCGATTTTTGGGATTGGATAAAATTAAGTTAGAAAAGAAAGAACTAGGCCATATCTATCAGATTC
AGGTTTTTAATAGCTATGGACAAGAAGAAATCTATCGCATGATATTGATGGAAACCAATATCAGTTCGGTTTCAACCAAT
ATCAAGTATGCAGCTATCTTGATTAATACCAGTCAGTTGGAGCAGGCCAGTCAAAAGCACGAGAAATTGATTGTGATTGT
GATGACAAGTTTCTGGATTTTGTCTTTGCTTGCCAGTCTCTATCTAGCTAGGGTCAGTGTTCGGCCCCTGCTTGAGAGCA
TGCAGAAGCAACAGTCCTTCGTGGAAAATGCCAGTCATGAGTTACGAACCCCACTTGCAGTTCTGCAAAATCGTTTAGAG
ACCCTTTTCCGTAAGCCGGAAGCTACCATTATGGATGTGAGCGAAAGCATTGCCTCTAGTTTAGAAGAAGTCCGAAATAT
GCGTTTTTTGACAACAAACTTGTTGAACTTAGCTCGTAGAGATGATGGCATTAAGCCAGAACTTGCAGAAGTTCCAACTA
GTTTTTTCAATACGACTTTCACAAACTATGAGATGATTGCTTCGGAAAATGATCGTGTCTTCCGTTTTGAAAATCGGATT
CATCGCACGATTGTCACAGACCAGCTTCTTCTGAAACAACTGATGACCATCTTATTTGATAATGCTGTCAAGTATACTGA
AGAGGATGGTGAAATTGATTTTCTTATCTCGGCGACCGATCGCAATCTGTATTTACTTGTTTCTGATAATGGAGTCGGTA
TTTCGACAGAAGATAAGAAGAAAATTTTTGATCGTTTTTATCGAGTGGACAAGGCTAGAACCCGCCAAAAAGGTGGATTT
GGTTTAGGATTATCTCTGGCCAAGCAAATTGTAGATGCGCTTAAAGGAACCATTACTGTTAAAGATAATAAACCAAAGGG
AACAATCTTTGAAGTGAAGATTGCTATCCACACACCATCTAAAAAGAAAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus pneumoniae Rx1

96.171

100

0.962

  ciaH Streptococcus pneumoniae D39

96.171

100

0.962

  ciaH Streptococcus pneumoniae R6

96.171

100

0.962

  ciaH Streptococcus pneumoniae TIGR4

96.171

100

0.962

  ciaH Streptococcus mutans UA159

55.862

97.973

0.547


Multiple sequence alignment