Detailed information NTG0106151

Bioinformatically predicted

Overview

• Name: comX/comX2
• Type: Regulator
• Locus tag: AAA990_RS09400
• Genome accession: NZ_AP028605
• Coordinates: 1816435..1816914 (-)
• Length: 159 a.a.
• NCBI ID: WP_000588873.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Pne4
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1811435..1821914

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA990_RS09400 (TKY183112_18260)	comX/comX2	1816435..1816914 (-)	480	WP_000588873.1	sigma-70 family RNA polymerase sigma factor	Regulator
AAA990_RS09405 (TKY183112_18270)	nusG	1817036..1817572 (-)	537	WP_000376736.1	transcription termination/antitermination protein NusG	-
AAA990_RS09410 (TKY183112_18280)	secE	1817627..1817803 (-)	177	WP_001210991.1	preprotein translocase subunit SecE	-
AAA990_RS09415 (TKY183112_18290)	rpmG	1817813..1817965 (-)	153	WP_001809375.1	50S ribosomal protein L33	-
AAA990_RS09420 (TKY183112_18300)	pbp2a	1818018..1820213 (-)	2196	WP_000762619.1	penicillin-binding protein PBP2A	-
AAA990_RS09425 (TKY183112_18310)	-	1820300..1821175 (+)	876	WP_078158201.1	RluA family pseudouridine synthase	-

Sequence

Protein

• Length: 159 a.a.
• Molecular weight: 19845.50 Da
• Isoelectric Point: 7.3795

>NTDB_id=106151 AAA990_RS09400 WP_000588873.1 1816435..1816914(-) (comX/comX2) [Streptococcus pneumoniae strain Pne4]
MIKELYEEVQGTVYKCRNEYYLHLWELSDWDQEGMLCLHELISREEGLVDDIPRLRKYFKTKFRNRILDYIRKQESQKRK
YDKEPYEEVGEISHRISEGGLWLDDYYLFHETLRDYRNKQSKEKQEELERVLSNERFRGRQRVLRDLRIVFKEFTIRTH

Nucleotide

• Length: 480 bp

>NTDB_id=106151 AAA990_RS09400 WP_000588873.1 1816435..1816914(-) (comX/comX2) [Streptococcus pneumoniae strain Pne4]
ATGATTAAAGAATTGTATGAAGAAGTCCAAGGGACTGTGTATAAGTGTAGAAATGAATATTACCTTCATTTATGGGAATT
ATCGGATTGGGACCAAGAAGGCATGCTCTGCTTACATGAATTGATTAGTAGAGAAGAAGGACTGGTAGACGATATTCCAC
GTTTAAGGAAATATTTCAAAACCAAGTTTCGAAATCGAATTTTAGACTATATCCGTAAGCAGGAAAGTCAGAAGCGTAAA
TACGATAAAGAACCCTATGAAGAAGTGGGTGAGATCAGTCATCGTATAAGTGAGGGGGGTCTCTGGCTAGATGATTATTA
TCTCTTTCATGAAACACTAAGAGATTATAGAAACAAACAAAGTAAAGAGAAACAAGAAGAACTAGAACGCGTCTTAAGCA
ATGAACGATTTCGAGGGCGTCAAAGAGTATTAAGAGACTTACGCATTGTGTTTAAGGAGTTTACTATCCGTACCCACTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/comX2	Streptococcus pneumoniae Rx1	99.371	100	0.994
comX/comX1	Streptococcus pneumoniae Rx1	99.371	100	0.994
comX/comX2	Streptococcus pneumoniae D39	99.371	100	0.994
comX/comX1	Streptococcus pneumoniae D39	99.371	100	0.994
comX/comX2	Streptococcus pneumoniae R6	99.371	100	0.994
comX/comX1	Streptococcus pneumoniae R6	99.371	100	0.994
comX/comX2	Streptococcus pneumoniae TIGR4	98.742	100	0.987
comX/comX1	Streptococcus pneumoniae TIGR4	98.742	100	0.987
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	91.824	100	0.918
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	91.824	100	0.918
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	89.937	100	0.899
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	88.608	99.371	0.881
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	49.359	98.113	0.484
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	49.359	98.113	0.484
comX/sigX	Streptococcus suis D9	46.358	94.969	0.44
comX/sigX	Streptococcus suis isolate S10	46.358	94.969	0.44
comX/sigX	Streptococcus suis P1/7	46.358	94.969	0.44
comX/sigX	Streptococcus mutans UA159	45.333	94.34	0.428
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	39.216	96.226	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	39.216	96.226	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	40	94.34	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	40	94.34	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	40	94.34	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	40	94.34	0.377