Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8924_RS05680 | Genome accession | NZ_AP028348 |
| Coordinates | 1097236..1097538 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-10403 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1092236..1102538
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8924_RS05655 (B10403_11150) | rpsR | 1092599..1092859 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8924_RS05660 (B10403_11160) | lon | 1092919..1095294 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| R8924_RS05665 (B10403_11170) | - | 1095311..1095958 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| R8924_RS05670 (B10403_11180) | fliW | 1096119..1096508 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8924_RS05675 (B10403_11190) | proC | 1096508..1097239 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8924_RS05680 (B10403_11200) | ctsT | 1097236..1097538 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8924_RS05685 (B10403_11210) | - | 1097535..1098197 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8924_RS05690 (B10403_11220) | - | 1098194..1098646 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8924_RS05695 (B10403_11230) | hemD | 1098643..1099272 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8924_RS05700 (B10403_11240) | thiE | 1099250..1099882 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8924_RS05705 (B10403_11250) | thiD | 1099872..1100684 (-) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8924_RS05710 (B10403_11260) | - | 1100681..1101367 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| R8924_RS05715 (B10403_11270) | - | 1101364..1102125 (-) | 762 | WP_317725645.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=104569 R8924_RS05680 WP_002853046.1 1097236..1097538(+) (ctsT) [Campylobacter jejuni strain BCH-10403]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104569 R8924_RS05680 WP_002853046.1 1097236..1097538(+) (ctsT) [Campylobacter jejuni strain BCH-10403]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |