Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACERCD_RS06680 | Genome accession | NZ_CP168756 |
| Coordinates | 1371870..1372844 (+) | Length | 324 a.a. |
| NCBI ID | WP_373442492.1 | Uniprot ID | - |
| Organism | Staphylococcus equorum strain SN42 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1366870..1377844
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACERCD_RS06650 (ACERCD_06650) | - | 1367051..1367590 (+) | 540 | WP_021339257.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ACERCD_RS06655 (ACERCD_06655) | - | 1367605..1369062 (+) | 1458 | WP_021339256.1 | rhomboid family intramembrane serine protease | - |
| ACERCD_RS06660 (ACERCD_06660) | - | 1369046..1369246 (+) | 201 | WP_002512453.1 | YqgQ family protein | - |
| ACERCD_RS06665 (ACERCD_06665) | - | 1369836..1370822 (+) | 987 | WP_021339255.1 | glucokinase | - |
| ACERCD_RS06670 (ACERCD_06670) | - | 1370822..1371145 (+) | 324 | WP_021339254.1 | MTH1187 family thiamine-binding protein | - |
| ACERCD_RS06675 (ACERCD_06675) | - | 1371147..1371770 (+) | 624 | WP_002507502.1 | MBL fold metallo-hydrolase | - |
| ACERCD_RS06680 (ACERCD_06680) | comGA | 1371870..1372844 (+) | 975 | WP_373442492.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACERCD_RS06685 (ACERCD_06685) | comGB | 1372816..1373883 (+) | 1068 | WP_021339252.1 | competence type IV pilus assembly protein ComGB | - |
| ACERCD_RS06690 (ACERCD_06690) | comGC | 1373908..1374225 (+) | 318 | WP_031265988.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACERCD_RS06695 (ACERCD_06695) | - | 1374254..1374649 (+) | 396 | WP_256092535.1 | competence protein | - |
| ACERCD_RS06700 (ACERCD_06700) | comGF | 1374636..1375349 (+) | 714 | WP_021339249.1 | competence type IV pilus minor pilin ComGF | - |
| ACERCD_RS06705 (ACERCD_06705) | - | 1375556..1376029 (+) | 474 | WP_373442710.1 | shikimate kinase | - |
| ACERCD_RS06710 (ACERCD_06710) | gcvT | 1376208..1377299 (+) | 1092 | WP_021339246.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37399.52 Da Isoelectric Point: 9.2141
>NTDB_id=1045566 ACERCD_RS06680 WP_373442492.1 1371870..1372844(+) (comGA) [Staphylococcus equorum strain SN42]
MKLLFNNIIEKAIQRNATDIHFIPSEKEVYIKFRIQDDLTFIESIRTHVYRKLLTYMKYQAGLDVSKHNSAQSGRYIYKL
KQIFYLRISRLPLSLGNESCVVRIIPQYFQKQNITHDIEKLYTLMNKKQGLILFSGPTGSGKSTLMYQMVMYAKEKLGLN
IITVEDPVEQLVEGVTQVSINEKAGINYESSFKAILRCDPDIILIGEVRDPTIAKYVIQASLSGHLVLTTIHANNCKGAL
LRLLEMGITKQEINQSILSVLNQRLITIYNSERKLIYEQLLQHDISYFLNNDYTLPNHFHNLSFHLKQMSKAGVICEETV
DRYI
MKLLFNNIIEKAIQRNATDIHFIPSEKEVYIKFRIQDDLTFIESIRTHVYRKLLTYMKYQAGLDVSKHNSAQSGRYIYKL
KQIFYLRISRLPLSLGNESCVVRIIPQYFQKQNITHDIEKLYTLMNKKQGLILFSGPTGSGKSTLMYQMVMYAKEKLGLN
IITVEDPVEQLVEGVTQVSINEKAGINYESSFKAILRCDPDIILIGEVRDPTIAKYVIQASLSGHLVLTTIHANNCKGAL
LRLLEMGITKQEINQSILSVLNQRLITIYNSERKLIYEQLLQHDISYFLNNDYTLPNHFHNLSFHLKQMSKAGVICEETV
DRYI
Nucleotide
Download Length: 975 bp
>NTDB_id=1045566 ACERCD_RS06680 WP_373442492.1 1371870..1372844(+) (comGA) [Staphylococcus equorum strain SN42]
TTGAAGCTATTATTTAACAACATAATTGAGAAAGCAATTCAGAGAAATGCTACTGATATACACTTTATACCTTCTGAAAA
GGAAGTGTATATCAAATTTAGAATTCAGGATGATTTAACTTTTATTGAATCAATTCGGACACATGTTTATAGAAAGCTGC
TTACTTATATGAAATATCAAGCTGGATTAGATGTATCAAAACATAATTCGGCACAAAGTGGAAGATACATATATAAACTA
AAACAAATATTTTATTTAAGAATCTCTAGGTTACCATTGTCTCTCGGTAATGAAAGTTGTGTTGTAAGAATCATTCCTCA
ATATTTTCAAAAGCAAAATATCACTCATGATATTGAAAAACTGTATACATTAATGAATAAAAAGCAAGGTTTAATACTAT
TTAGCGGTCCAACTGGATCTGGTAAAAGTACTTTAATGTATCAAATGGTTATGTATGCAAAGGAAAAGTTAGGTTTAAAT
ATCATAACTGTAGAAGATCCGGTGGAACAATTAGTTGAGGGCGTTACTCAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGAGAGTTCTTTTAAGGCAATACTAAGGTGTGATCCAGACATTATACTTATTGGAGAAGTTAGAGATCCTACGATAG
CAAAATACGTTATACAAGCAAGTTTAAGTGGTCACTTAGTATTAACTACAATACATGCTAACAATTGTAAGGGCGCGTTA
TTAAGATTATTAGAAATGGGCATAACAAAACAAGAAATTAACCAATCTATTTTGAGTGTGTTAAACCAAAGACTAATCAC
AATATATAACAGTGAAAGAAAATTAATTTATGAACAGTTACTACAACACGATATAAGTTATTTTTTAAATAATGATTACA
CATTACCAAACCATTTTCATAATTTATCCTTTCATTTAAAGCAAATGTCTAAAGCAGGTGTTATTTGTGAAGAAACTGTT
GATCGCTATATTTAA
TTGAAGCTATTATTTAACAACATAATTGAGAAAGCAATTCAGAGAAATGCTACTGATATACACTTTATACCTTCTGAAAA
GGAAGTGTATATCAAATTTAGAATTCAGGATGATTTAACTTTTATTGAATCAATTCGGACACATGTTTATAGAAAGCTGC
TTACTTATATGAAATATCAAGCTGGATTAGATGTATCAAAACATAATTCGGCACAAAGTGGAAGATACATATATAAACTA
AAACAAATATTTTATTTAAGAATCTCTAGGTTACCATTGTCTCTCGGTAATGAAAGTTGTGTTGTAAGAATCATTCCTCA
ATATTTTCAAAAGCAAAATATCACTCATGATATTGAAAAACTGTATACATTAATGAATAAAAAGCAAGGTTTAATACTAT
TTAGCGGTCCAACTGGATCTGGTAAAAGTACTTTAATGTATCAAATGGTTATGTATGCAAAGGAAAAGTTAGGTTTAAAT
ATCATAACTGTAGAAGATCCGGTGGAACAATTAGTTGAGGGCGTTACTCAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGAGAGTTCTTTTAAGGCAATACTAAGGTGTGATCCAGACATTATACTTATTGGAGAAGTTAGAGATCCTACGATAG
CAAAATACGTTATACAAGCAAGTTTAAGTGGTCACTTAGTATTAACTACAATACATGCTAACAATTGTAAGGGCGCGTTA
TTAAGATTATTAGAAATGGGCATAACAAAACAAGAAATTAACCAATCTATTTTGAGTGTGTTAAACCAAAGACTAATCAC
AATATATAACAGTGAAAGAAAATTAATTTATGAACAGTTACTACAACACGATATAAGTTATTTTTTAAATAATGATTACA
CATTACCAAACCATTTTCATAATTTATCCTTTCATTTAAAGCAAATGTCTAAAGCAGGTGTTATTTGTGAAGAAACTGTT
GATCGCTATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.802 |
100 |
0.608 |
| comGA | Staphylococcus aureus N315 |
60.802 |
100 |
0.608 |