Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   QOY19_RS06575 Genome accession   NZ_OX595791
Coordinates   1295310..1295750 (-) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae isolate MRI Z2-270     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1290310..1300750
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOY19_RS06560 - 1290968..1291594 (-) 627 WP_000449636.1 GTP pyrophosphokinase -
  QOY19_RS06565 rcrQ 1291702..1293456 (-) 1755 WP_283708366.1 ABC transporter ATP-binding protein Regulator
  QOY19_RS06570 rcrP 1293446..1295263 (-) 1818 WP_000481819.1 ABC transporter ATP-binding protein Regulator
  QOY19_RS06575 rcrR 1295310..1295750 (-) 441 WP_000431168.1 MarR family transcriptional regulator Regulator
  QOY19_RS06580 - 1296019..1298091 (+) 2073 WP_000726930.1 bifunctional metallophosphatase/5'-nucleotidase -
  QOY19_RS06585 - 1298128..1298538 (-) 411 WP_000594935.1 peptide deformylase -
  QOY19_RS06590 gdhA 1298608..1299957 (-) 1350 WP_000200435.1 NADP-specific glutamate dehydrogenase -
  QOY19_RS06595 - 1300125..1300634 (+) 510 WP_000870956.1 DUF308 domain-containing protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=1044871 QOY19_RS06575 WP_000431168.1 1295310..1295750(-) (rcrR) [Streptococcus agalactiae isolate MRI Z2-270]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=1044871 QOY19_RS06575 WP_000431168.1 1295310..1295750(-) (rcrR) [Streptococcus agalactiae isolate MRI Z2-270]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATCTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411