Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8628_RS05810 | Genome accession | NZ_AP028335 |
| Coordinates | 1095900..1096202 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-10174 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1090900..1101202
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8628_RS05785 (B10174_11340) | rpsR | 1091263..1091523 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8628_RS05790 (B10174_11350) | lon | 1091583..1093958 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| R8628_RS05795 (B10174_11360) | bamD | 1093975..1094622 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| R8628_RS05800 (B10174_11370) | fliW | 1094783..1095172 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8628_RS05805 (B10174_11380) | proC | 1095172..1095903 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8628_RS05810 (B10174_11390) | ctsT | 1095900..1096202 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8628_RS05815 (B10174_11400) | - | 1096199..1096861 (+) | 663 | WP_052785236.1 | hypothetical protein | - |
| R8628_RS05820 (B10174_11410) | - | 1096858..1097310 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8628_RS05825 (B10174_11420) | hemD | 1097307..1097936 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8628_RS05830 (B10174_11430) | thiE | 1097914..1098546 (-) | 633 | WP_317653224.1 | thiamine phosphate synthase | - |
| R8628_RS05835 (B10174_11440) | thiD | 1098536..1099348 (-) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8628_RS05840 (B10174_11450) | - | 1099345..1100031 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| R8628_RS05845 (B10174_11460) | - | 1100028..1100789 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=104359 R8628_RS05810 WP_002853046.1 1095900..1096202(+) (ctsT) [Campylobacter jejuni strain BCH-10174]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104359 R8628_RS05810 WP_002853046.1 1095900..1096202(+) (ctsT) [Campylobacter jejuni strain BCH-10174]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |