Detailed information NTG1040173

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACDW34_RS08120
• Genome accession: NZ_CP167896
• Coordinates: 1676877..1678064 (+)
• Length: 395 a.a.
• NCBI ID: WP_174492793.1
• Uniprot ID: -
• Organism: Acinetobacter piscicola strain p38
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1671877..1683064

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACDW34_RS08105 (ACDW34_08105)	-	1672374..1673048 (+)	675	WP_372404785.1	class I SAM-dependent methyltransferase	-
ACDW34_RS08110 (ACDW34_08110)	plsB	1673104..1675272 (-)	2169	WP_372404787.1	glycerol-3-phosphate 1-O-acyltransferase PlsB	-
ACDW34_RS08115 (ACDW34_08115)	cysK	1675581..1676579 (+)	999	WP_130073704.1	cysteine synthase A	-
ACDW34_RS08120 (ACDW34_08120)	pilU	1676877..1678064 (+)	1188	WP_174492793.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACDW34_RS08125 (ACDW34_08125)	-	1678222..1678695 (+)	474	WP_130073702.1	hypothetical protein	-
ACDW34_RS08130 (ACDW34_08130)	-	1678816..1679595 (-)	780	WP_130073701.1	ferredoxin--NADP reductase	-
ACDW34_RS08135 (ACDW34_08135)	tsaA	1679701..1680420 (+)	720	WP_130073700.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
ACDW34_RS08140 (ACDW34_08140)	-	1680507..1682723 (-)	2217	WP_372404793.1	SEL1-like repeat protein	-

Sequence

Protein

• Length: 395 a.a.
• Molecular weight: 44440.67 Da
• Isoelectric Point: 6.1529

>NTDB_id=1040173 ACDW34_RS08120 WP_174492793.1 1676877..1678064(+) (pilU) [Acinetobacter piscicola strain p38]
MYTAELLQEAQRYMFHMLSKVVEFGGSDLFISADFPPSIKHQGLMKSLGQPELTAEKAKLFAYSLMNAKQRQDFETELEC
NFAISVPNVSRFRVNVFQQQLQVGMVIRTITAEIPNFTKLKLPESLKHVIMEKRGLVLVVGGTGSGKSTSLAAMIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDCHTWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQALDRIINFFPEERRNQLLMDLSSNMKAIISQRLIRTENNDGRRAAVEILLNTPLISDVILKGNFHEIKEIMTKS
RELGMQTFDQALFDLYNEGAISYDEALRNADSTNELRLQIKLKATRNQQNGASTATSLSMLHEVEAADEDENAAE

Nucleotide

• Length: 1188 bp

>NTDB_id=1040173 ACDW34_RS08120 WP_174492793.1 1676877..1678064(+) (pilU) [Acinetobacter piscicola strain p38]
ATGTATACAGCTGAATTATTGCAAGAAGCACAACGCTATATGTTTCACATGCTTAGTAAAGTGGTTGAATTTGGCGGTTC
AGATCTGTTTATTTCGGCAGATTTCCCACCCAGTATTAAGCATCAGGGCTTGATGAAATCTCTAGGGCAACCAGAGCTCA
CAGCAGAAAAAGCTAAACTTTTTGCTTATAGCCTGATGAATGCCAAACAACGTCAAGATTTTGAAACAGAACTTGAATGT
AATTTTGCCATCAGTGTACCTAACGTTTCGCGTTTTCGAGTCAATGTTTTTCAACAACAATTACAAGTCGGTATGGTGAT
TCGTACCATTACTGCTGAAATTCCAAATTTTACCAAACTGAAATTACCTGAATCACTGAAACATGTGATTATGGAAAAAC
GTGGCTTGGTCCTTGTGGTGGGTGGAACAGGTTCAGGAAAGTCGACGTCATTGGCAGCGATGATTGACTATCGTAACGAA
AATTCAGCAGGGCATATTATTACGGTTGAAGACCCTGTGGAATATGTGCATAAGCATAAAAAATCGATGATTACCCATCG
TGAAGTTGGTGTGGATTGTCATACTTGGCACAATGCATTGAAAAACACCTTACGTCAGGCGCCCGATGTCATTTTAATTG
GTGAGATCCGTGATACAGAAACCATGGAACATGCCATTGCTTTTGCTGAAACAGGACATTTGTGTTTAGGTACTCTGCAT
GCAAATAATGCCAACCAAGCTTTAGACCGTATTATTAACTTTTTCCCTGAAGAGCGCCGTAATCAGCTGTTAATGGATTT
ATCATCAAATATGAAAGCCATTATTTCACAGCGTTTGATTCGCACTGAAAATAACGATGGACGTAGAGCAGCAGTTGAAA
TTTTACTCAATACACCTTTAATTTCCGATGTGATCTTAAAAGGTAATTTTCATGAAATTAAAGAAATCATGACCAAGTCG
CGTGAGCTTGGTATGCAAACTTTTGATCAGGCATTATTTGATTTATACAATGAAGGTGCGATTAGTTATGACGAAGCACT
GAGAAATGCAGATTCAACCAATGAATTACGCTTACAGATTAAGTTAAAAGCTACACGAAATCAGCAAAATGGGGCATCTA
CAGCGACCAGTTTAAGTATGTTGCATGAAGTCGAAGCAGCTGATGAAGATGAAAATGCTGCTGAATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (47-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	55.08	94.684	0.522
pilU	Acinetobacter baylyi ADP1	54.674	89.367	0.489
pilU	Vibrio cholerae strain A1552	48.656	94.177	0.458
pilT	Acinetobacter nosocomialis M2	43.865	82.532	0.362
pilT	Acinetobacter baumannii D1279779	43.865	82.532	0.362
pilT	Acinetobacter baumannii strain A118	43.865	82.532	0.362