Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | ABKQ09_RS02185 | Genome accession | NZ_CP166870 |
| Coordinates | 447627..448775 (+) | Length | 382 a.a. |
| NCBI ID | WP_061669569.1 | Uniprot ID | - |
| Organism | Bacillus atrophaeus strain F4 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 442627..453775
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABKQ09_RS02160 (ABKQ09_02160) | - | 443239..443913 (+) | 675 | WP_004430249.1 | amino acid ABC transporter permease | - |
| ABKQ09_RS02165 (ABKQ09_02165) | - | 443926..444675 (+) | 750 | WP_061669565.1 | amino acid ABC transporter ATP-binding protein | - |
| ABKQ09_RS02170 (ABKQ09_02170) | - | 444691..445842 (+) | 1152 | WP_061669566.1 | M20 peptidase aminoacylase family protein | - |
| ABKQ09_RS02175 (ABKQ09_02175) | - | 445839..447182 (+) | 1344 | WP_061669567.1 | MmgE/PrpD family protein | - |
| ABKQ09_RS02180 (ABKQ09_02180) | - | 447223..447432 (+) | 210 | Protein_396 | ATP-binding protein | - |
| ABKQ09_RS02185 (ABKQ09_02185) | rapC | 447627..448775 (+) | 1149 | WP_061669569.1 | Rap family tetratricopeptide repeat protein | Regulator |
| ABKQ09_RS02190 (ABKQ09_02190) | phrC | 448759..448878 (+) | 120 | WP_004430266.1 | PhrC/PhrF family phosphatase-inhibitory pheromone | Regulator |
| ABKQ09_RS02195 (ABKQ09_02195) | - | 449013..449120 (-) | 108 | WP_072053240.1 | YjcZ family sporulation protein | - |
| ABKQ09_RS02200 (ABKQ09_02200) | - | 449324..449407 (-) | 84 | WP_371176570.1 | YjcZ family sporulation protein | - |
| ABKQ09_RS02205 (ABKQ09_02205) | - | 449538..450902 (-) | 1365 | WP_061669570.1 | aspartate kinase | - |
| ABKQ09_RS02210 (ABKQ09_02210) | ceuB | 451335..452285 (+) | 951 | WP_010789705.1 | ABC transporter permease | Machinery gene |
| ABKQ09_RS02215 (ABKQ09_02215) | - | 452278..453225 (+) | 948 | WP_004430269.1 | iron chelate uptake ABC transporter family permease subunit | - |
Sequence
Protein
Download Length: 382 a.a. Molecular weight: 45799.06 Da Isoelectric Point: 4.8143
>NTDB_id=1035725 ABKQ09_RS02185 WP_061669569.1 447627..448775(+) (rapC) [Bacillus atrophaeus strain F4]
MKSEVIPSSAVGQKINEWYKYIRTFSVPDAEILKAEIEREIEHMEDDPNLLLYFSLMEFRHQLMLDYLEPLEKLKIEDQP
SLSELLRNIDSNQADLKGLLDYYVNFFRGMHEFDKREFISAITYYKQAEKRLSFVADHIERAEFYFKVAEAYYYMKQTYF
SLIHIKNAYEIYAEQETYNVRIIQCHFVFGVNLMDERRFEQAARHFELALHMAESENKAQLVGRALYNIGLCYYNQDLLE
PAIDYFERAVSIFESNDIIKSLPQAYFLITQIYYKCKNNSKAVEYHSRGYEYAKQTDDIDYMVKFEFLKTLYQAQPDEQG
IEKCFYYLKNKNMYADIEDLALVVAKYYYEQKNFEMSSSYFLKVEEARKQIQRSEGLYEIEI
MKSEVIPSSAVGQKINEWYKYIRTFSVPDAEILKAEIEREIEHMEDDPNLLLYFSLMEFRHQLMLDYLEPLEKLKIEDQP
SLSELLRNIDSNQADLKGLLDYYVNFFRGMHEFDKREFISAITYYKQAEKRLSFVADHIERAEFYFKVAEAYYYMKQTYF
SLIHIKNAYEIYAEQETYNVRIIQCHFVFGVNLMDERRFEQAARHFELALHMAESENKAQLVGRALYNIGLCYYNQDLLE
PAIDYFERAVSIFESNDIIKSLPQAYFLITQIYYKCKNNSKAVEYHSRGYEYAKQTDDIDYMVKFEFLKTLYQAQPDEQG
IEKCFYYLKNKNMYADIEDLALVVAKYYYEQKNFEMSSSYFLKVEEARKQIQRSEGLYEIEI
Nucleotide
Download Length: 1149 bp
>NTDB_id=1035725 ABKQ09_RS02185 WP_061669569.1 447627..448775(+) (rapC) [Bacillus atrophaeus strain F4]
ATGAAGAGCGAGGTGATTCCTTCTTCAGCAGTCGGTCAAAAAATTAACGAGTGGTATAAGTATATTCGTACGTTCAGTGT
ACCGGACGCCGAAATTCTAAAAGCCGAGATTGAACGGGAAATTGAACATATGGAAGACGATCCGAACTTGCTGCTATATT
TCTCATTAATGGAATTCCGCCACCAGCTGATGCTTGATTATCTTGAGCCGTTAGAAAAATTAAAAATAGAGGACCAGCCC
AGCTTGTCAGAATTACTGCGCAACATTGACAGCAATCAGGCTGATTTAAAAGGGCTGCTTGATTATTATGTAAACTTTTT
TCGGGGGATGCACGAATTTGATAAGAGAGAATTCATTTCAGCCATCACTTATTACAAACAGGCTGAAAAAAGACTTTCCT
TTGTAGCGGATCATATTGAAAGAGCCGAGTTCTATTTTAAAGTGGCCGAAGCTTATTACTATATGAAACAGACGTATTTC
TCACTGATCCATATCAAAAATGCCTACGAAATATATGCCGAGCAAGAAACATATAATGTGAGAATTATCCAGTGTCATTT
TGTTTTCGGAGTAAATTTGATGGATGAAAGGCGTTTCGAACAAGCCGCGCGCCATTTTGAACTCGCATTACATATGGCGG
AATCAGAAAATAAAGCACAATTGGTCGGAAGAGCGCTTTATAATATTGGGTTGTGTTATTACAATCAAGATCTTCTTGAG
CCTGCCATTGACTATTTTGAGAGAGCGGTTTCTATATTCGAAAGCAACGACATCATTAAATCCCTTCCTCAGGCATATTT
TCTGATCACGCAGATTTATTATAAATGTAAAAATAATTCTAAAGCAGTGGAATATCACAGCAGGGGTTATGAATATGCTA
AACAAACAGATGATATTGACTACATGGTGAAATTTGAATTTTTAAAAACTCTATATCAAGCCCAGCCGGATGAACAAGGA
ATCGAAAAATGCTTTTATTACCTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGCACTAGTAGTAGCTAAATA
TTACTATGAACAGAAAAACTTCGAAATGTCATCTTCCTACTTTCTCAAAGTAGAAGAGGCCAGAAAACAAATACAAAGGA
GTGAAGGTTTATATGAAATTGAAATCTAA
ATGAAGAGCGAGGTGATTCCTTCTTCAGCAGTCGGTCAAAAAATTAACGAGTGGTATAAGTATATTCGTACGTTCAGTGT
ACCGGACGCCGAAATTCTAAAAGCCGAGATTGAACGGGAAATTGAACATATGGAAGACGATCCGAACTTGCTGCTATATT
TCTCATTAATGGAATTCCGCCACCAGCTGATGCTTGATTATCTTGAGCCGTTAGAAAAATTAAAAATAGAGGACCAGCCC
AGCTTGTCAGAATTACTGCGCAACATTGACAGCAATCAGGCTGATTTAAAAGGGCTGCTTGATTATTATGTAAACTTTTT
TCGGGGGATGCACGAATTTGATAAGAGAGAATTCATTTCAGCCATCACTTATTACAAACAGGCTGAAAAAAGACTTTCCT
TTGTAGCGGATCATATTGAAAGAGCCGAGTTCTATTTTAAAGTGGCCGAAGCTTATTACTATATGAAACAGACGTATTTC
TCACTGATCCATATCAAAAATGCCTACGAAATATATGCCGAGCAAGAAACATATAATGTGAGAATTATCCAGTGTCATTT
TGTTTTCGGAGTAAATTTGATGGATGAAAGGCGTTTCGAACAAGCCGCGCGCCATTTTGAACTCGCATTACATATGGCGG
AATCAGAAAATAAAGCACAATTGGTCGGAAGAGCGCTTTATAATATTGGGTTGTGTTATTACAATCAAGATCTTCTTGAG
CCTGCCATTGACTATTTTGAGAGAGCGGTTTCTATATTCGAAAGCAACGACATCATTAAATCCCTTCCTCAGGCATATTT
TCTGATCACGCAGATTTATTATAAATGTAAAAATAATTCTAAAGCAGTGGAATATCACAGCAGGGGTTATGAATATGCTA
AACAAACAGATGATATTGACTACATGGTGAAATTTGAATTTTTAAAAACTCTATATCAAGCCCAGCCGGATGAACAAGGA
ATCGAAAAATGCTTTTATTACCTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGCACTAGTAGTAGCTAAATA
TTACTATGAACAGAAAAACTTCGAAATGTCATCTTCCTACTTTCTCAAAGTAGAAGAGGCCAGAAAACAAATACAAAGGA
GTGAAGGTTTATATGAAATTGAAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
84.817 |
100 |
0.848 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
57.368 |
99.476 |
0.571 |