Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | QUE75_RS03030 | Genome accession | NZ_AP028062 |
| Coordinates | 663499..664620 (+) | Length | 373 a.a. |
| NCBI ID | WP_286253551.1 | Uniprot ID | - |
| Organism | Marinobacter shengliensis strain D49 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 658499..669620
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE75_RS03010 (MAALD49_05960) | - | 659978..660562 (-) | 585 | WP_061332558.1 | YggT family protein | - |
| QUE75_RS03015 (MAALD49_05970) | proC | 660585..661418 (-) | 834 | WP_286253545.1 | pyrroline-5-carboxylate reductase | - |
| QUE75_RS03020 (MAALD49_05980) | - | 661482..662195 (-) | 714 | WP_106694451.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| QUE75_RS03025 (MAALD49_05990) | pilT | 662248..663282 (+) | 1035 | WP_008174189.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| QUE75_RS03030 (MAALD49_06000) | pilU | 663499..664620 (+) | 1122 | WP_286253551.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| QUE75_RS03035 (MAALD49_06010) | - | 664779..666152 (+) | 1374 | WP_106694452.1 | OmpP1/FadL family transporter | - |
| QUE75_RS03040 (MAALD49_06020) | - | 666192..666545 (-) | 354 | WP_106694532.1 | hypothetical protein | - |
| QUE75_RS03045 (MAALD49_06030) | polA | 666742..669474 (-) | 2733 | WP_286253554.1 | DNA polymerase I | - |
Sequence
Protein
Download Length: 373 a.a. Molecular weight: 41510.73 Da Isoelectric Point: 6.6618
>NTDB_id=103456 QUE75_RS03030 WP_286253551.1 663499..664620(+) (pilU) [Marinobacter shengliensis strain D49]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGKVLPVTKNALTPEQTREFVYGSMNDKQRAEFEETHECNFAISARGIGR
FRVSAFFQRNLCGMVLRRIEVKIPQIDDLALPEIVKDLAMTKRGLIMFVGATGTGKSTSLAAMLGHRNRNSRGHIISIED
PIEFVHQHQGCIVTQREVGIDTESFEVALKNTLRQAPDVILIGEVRTRQTMEYSVQFAETGHLCLATLHANNANQALDRI
IQFFPPEQHNQIWMDLSLNLRAIVAQQLVPTPDGKGRKAVIEVLINTPLVADLIRKAEVHKLKELMAKSNESGMQTFDQA
LYRLYAEGSITYEDALAHADSANDLRLMIKLGADAQGADKLSSSVDKLTIQDD
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGKVLPVTKNALTPEQTREFVYGSMNDKQRAEFEETHECNFAISARGIGR
FRVSAFFQRNLCGMVLRRIEVKIPQIDDLALPEIVKDLAMTKRGLIMFVGATGTGKSTSLAAMLGHRNRNSRGHIISIED
PIEFVHQHQGCIVTQREVGIDTESFEVALKNTLRQAPDVILIGEVRTRQTMEYSVQFAETGHLCLATLHANNANQALDRI
IQFFPPEQHNQIWMDLSLNLRAIVAQQLVPTPDGKGRKAVIEVLINTPLVADLIRKAEVHKLKELMAKSNESGMQTFDQA
LYRLYAEGSITYEDALAHADSANDLRLMIKLGADAQGADKLSSSVDKLTIQDD
Nucleotide
Download Length: 1122 bp
>NTDB_id=103456 QUE75_RS03030 WP_286253551.1 663499..664620(+) (pilU) [Marinobacter shengliensis strain D49]
ATGGAATTCGAAAAACTGTTACGGCTGATGGTGGAAAAAGGCGGTTCGGACCTGTTTATTACAGCGGGTGTGCCGCCGAG
CATGAAGGTAAACGGGAAAGTGCTCCCGGTCACCAAAAACGCGCTGACGCCGGAGCAGACGCGGGAGTTCGTCTACGGCT
CCATGAACGACAAACAGCGCGCCGAATTCGAAGAAACCCACGAATGTAACTTCGCCATCAGTGCCCGGGGCATTGGCCGT
TTCCGGGTGTCAGCGTTCTTCCAGCGCAACCTGTGCGGCATGGTATTGCGACGGATTGAAGTGAAAATTCCCCAGATTGA
CGACCTGGCGCTGCCCGAGATCGTCAAAGATCTGGCCATGACCAAGCGTGGCCTGATCATGTTTGTGGGCGCCACCGGTA
CCGGTAAGTCCACCTCCCTGGCCGCCATGCTCGGCCACCGTAACCGCAACAGCCGCGGCCACATCATCTCCATCGAAGAC
CCCATTGAATTCGTGCACCAGCACCAGGGTTGCATCGTCACCCAGCGGGAAGTGGGTATCGACACCGAAAGCTTCGAGGT
GGCCCTGAAAAACACTCTGCGACAGGCGCCTGACGTTATCCTGATTGGTGAGGTGCGTACCCGCCAGACCATGGAGTATT
CGGTACAGTTCGCAGAAACCGGCCACCTGTGTCTGGCCACCCTGCACGCCAACAACGCCAACCAGGCCCTGGACCGGATT
ATCCAGTTCTTCCCGCCGGAACAGCACAACCAGATCTGGATGGACCTCTCCCTGAACCTCCGCGCCATCGTGGCTCAGCA
GCTGGTGCCGACGCCGGATGGCAAAGGCCGCAAGGCCGTAATCGAAGTATTGATCAACACGCCGCTGGTGGCGGACCTGA
TTCGGAAAGCCGAAGTGCACAAACTCAAGGAGTTGATGGCCAAGTCCAACGAATCCGGCATGCAGACGTTTGACCAGGCG
TTGTACCGGCTGTACGCCGAAGGCTCCATCACCTATGAAGACGCTTTGGCCCACGCGGATTCCGCGAACGACCTGCGCCT
GATGATCAAGCTCGGTGCCGATGCCCAGGGTGCCGACAAGCTGTCATCTTCGGTCGACAAGCTCACCATTCAGGACGATT
GA
ATGGAATTCGAAAAACTGTTACGGCTGATGGTGGAAAAAGGCGGTTCGGACCTGTTTATTACAGCGGGTGTGCCGCCGAG
CATGAAGGTAAACGGGAAAGTGCTCCCGGTCACCAAAAACGCGCTGACGCCGGAGCAGACGCGGGAGTTCGTCTACGGCT
CCATGAACGACAAACAGCGCGCCGAATTCGAAGAAACCCACGAATGTAACTTCGCCATCAGTGCCCGGGGCATTGGCCGT
TTCCGGGTGTCAGCGTTCTTCCAGCGCAACCTGTGCGGCATGGTATTGCGACGGATTGAAGTGAAAATTCCCCAGATTGA
CGACCTGGCGCTGCCCGAGATCGTCAAAGATCTGGCCATGACCAAGCGTGGCCTGATCATGTTTGTGGGCGCCACCGGTA
CCGGTAAGTCCACCTCCCTGGCCGCCATGCTCGGCCACCGTAACCGCAACAGCCGCGGCCACATCATCTCCATCGAAGAC
CCCATTGAATTCGTGCACCAGCACCAGGGTTGCATCGTCACCCAGCGGGAAGTGGGTATCGACACCGAAAGCTTCGAGGT
GGCCCTGAAAAACACTCTGCGACAGGCGCCTGACGTTATCCTGATTGGTGAGGTGCGTACCCGCCAGACCATGGAGTATT
CGGTACAGTTCGCAGAAACCGGCCACCTGTGTCTGGCCACCCTGCACGCCAACAACGCCAACCAGGCCCTGGACCGGATT
ATCCAGTTCTTCCCGCCGGAACAGCACAACCAGATCTGGATGGACCTCTCCCTGAACCTCCGCGCCATCGTGGCTCAGCA
GCTGGTGCCGACGCCGGATGGCAAAGGCCGCAAGGCCGTAATCGAAGTATTGATCAACACGCCGCTGGTGGCGGACCTGA
TTCGGAAAGCCGAAGTGCACAAACTCAAGGAGTTGATGGCCAAGTCCAACGAATCCGGCATGCAGACGTTTGACCAGGCG
TTGTACCGGCTGTACGCCGAAGGCTCCATCACCTATGAAGACGCTTTGGCCCACGCGGATTCCGCGAACGACCTGCGCCT
GATGATCAAGCTCGGTGCCGATGCCCAGGGTGCCGACAAGCTGTCATCTTCGGTCGACAAGCTCACCATTCAGGACGATT
GA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
78.976 |
99.464 |
0.786 |
| pilU | Acinetobacter baylyi ADP1 |
64.607 |
95.442 |
0.617 |
| pilU | Vibrio cholerae strain A1552 |
56.757 |
99.196 |
0.563 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
42.773 |
90.885 |
0.389 |
| pilT | Acinetobacter baumannii D1279779 |
41.194 |
89.812 |
0.37 |
| pilT | Acinetobacter baumannii strain A118 |
41.194 |
89.812 |
0.37 |
| pilT | Acinetobacter nosocomialis M2 |
40.896 |
89.812 |
0.367 |
| pilT | Pseudomonas aeruginosa PAK |
40.597 |
89.812 |
0.365 |
| pilT | Pseudomonas stutzeri DSM 10701 |
40.299 |
89.812 |
0.362 |
| pilT | Legionella pneumophila strain Lp02 |
40.299 |
89.812 |
0.362 |
| pilT | Legionella pneumophila strain ERS1305867 |
40.299 |
89.812 |
0.362 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
40.419 |
89.544 |
0.362 |
| pilT | Vibrio cholerae strain A1552 |
40.419 |
89.544 |
0.362 |