Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   AB1F57_RS11355 Genome accession   NZ_CP162268
Coordinates   2240996..2241730 (-) Length   244 a.a.
NCBI ID   WP_105137617.1    Uniprot ID   -
Organism   Streptococcus sp. ZY1909104     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2235996..2246730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F57_RS11320 (AB1F57_11320) - 2236034..2236342 (-) 309 WP_238143413.1 YlxQ-related RNA-binding protein -
  AB1F57_RS11325 (AB1F57_11325) - 2236329..2236625 (-) 297 WP_105111611.1 YlxR family protein -
  AB1F57_RS11330 (AB1F57_11330) nusA 2236642..2237796 (-) 1155 WP_105122962.1 transcription termination factor NusA -
  AB1F57_RS11335 (AB1F57_11335) rimP 2237846..2238316 (-) 471 WP_367985760.1 ribosome maturation factor RimP -
  AB1F57_RS11340 (AB1F57_11340) trmB 2238477..2239112 (-) 636 WP_105137615.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  AB1F57_RS11345 (AB1F57_11345) - 2239109..2239903 (-) 795 WP_105111607.1 phosphotransferase family protein -
  AB1F57_RS11350 (AB1F57_11350) - 2239953..2240999 (-) 1047 WP_105137616.1 ABC transporter permease -
  AB1F57_RS11355 (AB1F57_11355) pptA 2240996..2241730 (-) 735 WP_105137617.1 ABC transporter ATP-binding protein Regulator
  AB1F57_RS11360 (AB1F57_11360) - 2241792..2242205 (+) 414 WP_105137618.1 HIT family protein -
  AB1F57_RS11365 (AB1F57_11365) - 2242208..2242522 (+) 315 WP_105111603.1 chemotaxis protein -
  AB1F57_RS11370 (AB1F57_11370) - 2242982..2244181 (-) 1200 WP_170238694.1 LCP family protein -
  AB1F57_RS11375 (AB1F57_11375) - 2244181..2244705 (-) 525 WP_105111601.1 GNAT family N-acetyltransferase -
  AB1F57_RS11380 (AB1F57_11380) tsaE 2244698..2245138 (-) 441 WP_105111600.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  AB1F57_RS11385 (AB1F57_11385) - 2245222..2246683 (-) 1462 Protein_2210 NCS2 family permease -

Sequence


Protein


Download         Length: 244 a.a.        Molecular weight: 27040.45 Da        Isoelectric Point: 4.5525

>NTDB_id=1024710 AB1F57_RS11355 WP_105137617.1 2240996..2241730(-) (pptA) [Streptococcus sp. ZY1909104]
MLEVKNITGGYANIPVLHDVDFKVKDGELVGLIGLNGAGKSTTIKEIIGLLSPYKGEILIDGQGINEDMATYRKKIGFIP
ETPSLYEELTLKEHIELVMMAYDLEAESAWARVQELLAIFRLEDRLDWFPVNFSKGMKQKVMIICALMVEPSLLIVDEPF
LGLDPIAIADLINLLNQAKAQGSSILMSTHVLDSAEKMCDRFVILHKGRVKATGNLTDLRQEFAMQDASLNEIYLSLTQE
GGQG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=1024710 AB1F57_RS11355 WP_105137617.1 2240996..2241730(-) (pptA) [Streptococcus sp. ZY1909104]
ATGTTAGAAGTAAAAAATATAACAGGTGGCTACGCCAATATTCCTGTTTTACATGATGTAGATTTTAAGGTGAAGGATGG
GGAGCTAGTCGGCTTGATTGGCTTGAATGGTGCCGGGAAATCGACTACTATTAAAGAAATCATCGGTCTCCTAAGCCCTT
ACAAAGGAGAAATTCTAATTGATGGGCAGGGCATCAACGAAGACATGGCTACCTATCGAAAAAAAATTGGTTTTATACCT
GAAACGCCTAGTCTCTATGAGGAACTGACCCTGAAAGAGCATATCGAGTTAGTGATGATGGCCTATGATTTGGAAGCTGA
ATCTGCCTGGGCGCGTGTTCAAGAACTATTGGCTATTTTTAGGCTGGAAGACCGTTTGGACTGGTTCCCTGTGAATTTTT
CAAAAGGCATGAAACAAAAGGTCATGATTATTTGCGCCCTTATGGTTGAACCGAGTTTGCTGATTGTCGATGAACCTTTC
TTGGGTCTGGATCCGATTGCGATTGCGGATTTAATTAACTTGCTTAATCAAGCAAAGGCTCAGGGAAGCTCCATTTTGAT
GTCCACCCATGTTCTCGATTCCGCTGAAAAAATGTGTGATCGGTTCGTTATCCTACATAAGGGTCGGGTCAAGGCTACGG
GCAATCTGACTGACCTACGCCAGGAATTTGCCATGCAGGATGCTAGCCTTAACGAGATTTATCTTAGTTTGACCCAAGAA
GGAGGGCAGGGATGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

69.038

97.951

0.676

  pptA Streptococcus salivarius strain HSISS4

69.038

97.951

0.676


Multiple sequence alignment