Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | ABVR71_RS07225 | Genome accession | NZ_CP162121 |
| Coordinates | 1659551..1660735 (-) | Length | 394 a.a. |
| NCBI ID | WP_014483649.1 | Uniprot ID | A0A2K9BQ95 |
| Organism | Bifidobacterium breve strain BS2-PS2 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1656911..1698925 | 1659551..1660735 | within | 0 |
Gene organization within MGE regions
Location: 1656911..1698925
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABVR71_RS07210 (ABVR71_07210) | raiA | 1657570..1658232 (-) | 663 | WP_014483651.1 | ribosome-associated translation inhibitor RaiA | - |
| ABVR71_RS07220 (ABVR71_07220) | - | 1658955..1659554 (-) | 600 | WP_003830647.1 | regulatory protein RecX | - |
| ABVR71_RS07225 (ABVR71_07225) | recA | 1659551..1660735 (-) | 1185 | WP_014483649.1 | recombinase RecA | Machinery gene |
| ABVR71_RS07230 (ABVR71_07230) | - | 1661042..1661275 (-) | 234 | WP_003830645.1 | DUF3046 domain-containing protein | - |
| ABVR71_RS07235 (ABVR71_07235) | - | 1661382..1661900 (-) | 519 | WP_003830644.1 | helix-turn-helix domain-containing protein | - |
| ABVR71_RS07240 (ABVR71_07240) | - | 1661960..1662517 (-) | 558 | WP_003830643.1 | CinA family protein | - |
| ABVR71_RS07245 (ABVR71_07245) | pgsA | 1662618..1663253 (-) | 636 | WP_015438915.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| ABVR71_RS07250 (ABVR71_07250) | - | 1663432..1666287 (-) | 2856 | WP_003830641.1 | DNA translocase FtsK | - |
| ABVR71_RS07255 (ABVR71_07255) | - | 1666498..1667247 (+) | 750 | WP_033892489.1 | Fic family protein | - |
| ABVR71_RS07260 (ABVR71_07260) | miaA | 1667290..1668273 (-) | 984 | WP_003830639.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| ABVR71_RS07265 (ABVR71_07265) | miaB | 1668396..1669847 (-) | 1452 | WP_016462777.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| ABVR71_RS07270 (ABVR71_07270) | - | 1669920..1670720 (+) | 801 | WP_003830637.1 | GTP pyrophosphokinase family protein | - |
| ABVR71_RS07275 (ABVR71_07275) | - | 1670717..1671664 (-) | 948 | WP_003830636.1 | DMT family transporter | - |
| ABVR71_RS07280 (ABVR71_07280) | - | 1671787..1672608 (-) | 822 | WP_003830635.1 | Bax inhibitor-1/YccA family protein | - |
| ABVR71_RS07285 (ABVR71_07285) | - | 1672687..1673472 (+) | 786 | WP_003830634.1 | response regulator transcription factor | - |
| ABVR71_RS07290 (ABVR71_07290) | - | 1673535..1674173 (+) | 639 | WP_003830633.1 | GNAT family N-acetyltransferase | - |
| ABVR71_RS07295 (ABVR71_07295) | acnA | 1674292..1676991 (-) | 2700 | WP_032738324.1 | aconitate hydratase AcnA | - |
| ABVR71_RS07300 (ABVR71_07300) | - | 1677110..1679722 (-) | 2613 | WP_003830631.1 | cation-translocating P-type ATPase | - |
| ABVR71_RS07305 (ABVR71_07305) | - | 1679787..1680371 (-) | 585 | WP_003830630.1 | hypothetical protein | - |
| ABVR71_RS07310 (ABVR71_07310) | - | 1680383..1681642 (-) | 1260 | WP_003830629.1 | class I SAM-dependent RNA methyltransferase | - |
| ABVR71_RS07315 (ABVR71_07315) | - | 1681632..1682408 (-) | 777 | WP_003830628.1 | DUF3159 domain-containing protein | - |
| ABVR71_RS07320 (ABVR71_07320) | - | 1682424..1683269 (-) | 846 | WP_003830627.1 | DUF3710 domain-containing protein | - |
| ABVR71_RS07325 (ABVR71_07325) | - | 1683394..1684254 (+) | 861 | WP_003830626.1 | exodeoxyribonuclease III | - |
| ABVR71_RS07330 (ABVR71_07330) | - | 1684563..1686572 (-) | 2010 | WP_003830625.1 | ABC transporter ATP-binding protein | - |
| ABVR71_RS07335 (ABVR71_07335) | - | 1686595..1687599 (-) | 1005 | WP_003830624.1 | ABC transporter permease | - |
| ABVR71_RS07340 (ABVR71_07340) | - | 1687618..1688544 (-) | 927 | WP_003830623.1 | ABC transporter permease | - |
| ABVR71_RS07345 (ABVR71_07345) | - | 1688934..1690574 (-) | 1641 | WP_003830622.1 | ABC transporter substrate-binding protein | - |
| ABVR71_RS07350 (ABVR71_07350) | - | 1690828..1691847 (-) | 1020 | WP_003830621.1 | tyrosine recombinase XerC | - |
| ABVR71_RS07355 (ABVR71_07355) | - | 1692009..1692821 (+) | 813 | WP_003830620.1 | ABC transporter ATP-binding protein | - |
| ABVR71_RS07360 (ABVR71_07360) | - | 1692818..1695676 (+) | 2859 | WP_003830619.1 | ABC transporter permease | - |
| ABVR71_RS07365 (ABVR71_07365) | - | 1695929..1696186 (-) | 258 | WP_025263055.1 | DUF6725 family protein | - |
| ABVR71_RS07370 (ABVR71_07370) | - | 1696272..1697288 (-) | 1017 | WP_003830617.1 | prephenate dehydrogenase/arogenate dehydrogenase family protein | - |
| ABVR71_RS07375 (ABVR71_07375) | - | 1697282..1698262 (-) | 981 | WP_003830616.1 | prephenate dehydratase domain-containing protein | - |
| ABVR71_RS07380 (ABVR71_07380) | - | 1698321..1698761 (-) | 441 | WP_019727473.1 | alcohol dehydrogenase | - |
Sequence
Protein
Download Length: 394 a.a. Molecular weight: 41647.34 Da Isoelectric Point: 5.8556
>NTDB_id=1024184 ABVR71_RS07225 WP_014483649.1 1659551..1660735(-) (recA) [Bifidobacterium breve strain BS2-PS2]
MALETKPAQDPATETKHELDPKRKAALDTALAQVEKSFGKGSAMRLGDQPVQNVEVIPTGSLALDMALGIGGLPKGRIVE
IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVI
DSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRL
DIRRIQTLKNGDEAVGNRTRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQGRE
KVRQFLKDNPAITEEIENKVKAEFGLIGSADQFAEDEDAAAAAAVSEAAAADAAKDTKATAAPAAKSSRAKARS
MALETKPAQDPATETKHELDPKRKAALDTALAQVEKSFGKGSAMRLGDQPVQNVEVIPTGSLALDMALGIGGLPKGRIVE
IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVI
DSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRL
DIRRIQTLKNGDEAVGNRTRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQGRE
KVRQFLKDNPAITEEIENKVKAEFGLIGSADQFAEDEDAAAAAAVSEAAAADAAKDTKATAAPAAKSSRAKARS
Nucleotide
Download Length: 1185 bp
>NTDB_id=1024184 ABVR71_RS07225 WP_014483649.1 1659551..1660735(-) (recA) [Bifidobacterium breve strain BS2-PS2]
ATGGCACTTGAGACCAAGCCGGCCCAAGATCCGGCAACCGAGACCAAGCACGAGCTCGATCCCAAGCGCAAGGCGGCGCT
GGACACTGCTTTGGCGCAGGTCGAAAAAAGCTTCGGCAAGGGCTCGGCCATGCGCCTCGGCGATCAGCCCGTGCAAAATG
TCGAAGTAATCCCTACCGGTTCGCTCGCGCTCGACATGGCGTTGGGCATTGGCGGCCTGCCGAAGGGCCGCATCGTGGAA
ATCTATGGTCCCGAATCGTCCGGTAAAACCACGCTTGCCCTGCATGTGGTGGCCAATGCCCAGAAGAAGGGTGGCGTGGC
CGCATACATTGACGCCGAGCACGCGCTCGATCCGGCCTATGCTCGCAAACTTGGCGTGGACACTGATTCGCTTATCGTTT
CTCAGCCGGACAACGGCGAACAGGCTCTTGAGATTGCAGACATGCTGATTCGTTCTGGCGCGCTTGATGTCATCGTTATC
GATTCGGTGGCGGCTCTGGTGCCAAAGGCCGAGATCGAAGGCGAGATGGGAGACAGCCACGTCGGTTTGCAGGCCCGACT
CATGAGCCAGGCTCTGCGCAAGATGACCGGTGCCTTGGCCCAAGCAGGTACCACCGCCATCTTCATCAACCAGCTACGCG
AAAAGATCGGCGTGTTCTTCGGTAATCCCGAAACCACTACCGGTGGCAAGGCTCTGAAGTTCTATGCCTCTGTGCGTCTT
GACATTCGCCGTATCCAGACCTTGAAGAACGGTGATGAAGCGGTGGGCAACCGTACGCGCGTCAAGGTGGTCAAGAACAA
GATGGCCCCGCCCTTCAAGTCCGCCGAATTCGACATGCTTTACGGCGAAGGTATCTCCCGCGAAGGTTCGGTCATCGACA
TGGCCCAACAGGTCGGCGTGGTCAAGAAGTCCGGCTCGTGGTTCACCTATGAGGGCGACCAGCTTGGTCAGGGTCGAGAG
AAGGTTCGTCAGTTCCTCAAGGACAACCCGGCCATCACCGAAGAGATTGAAAACAAGGTCAAGGCAGAATTTGGTTTGAT
CGGTTCCGCCGATCAGTTTGCCGAAGACGAAGACGCTGCTGCAGCTGCCGCAGTCAGCGAGGCCGCTGCGGCCGATGCCG
CCAAGGACACCAAGGCCACTGCAGCGCCTGCCGCCAAGTCGTCTCGCGCCAAGGCCCGATCATGA
ATGGCACTTGAGACCAAGCCGGCCCAAGATCCGGCAACCGAGACCAAGCACGAGCTCGATCCCAAGCGCAAGGCGGCGCT
GGACACTGCTTTGGCGCAGGTCGAAAAAAGCTTCGGCAAGGGCTCGGCCATGCGCCTCGGCGATCAGCCCGTGCAAAATG
TCGAAGTAATCCCTACCGGTTCGCTCGCGCTCGACATGGCGTTGGGCATTGGCGGCCTGCCGAAGGGCCGCATCGTGGAA
ATCTATGGTCCCGAATCGTCCGGTAAAACCACGCTTGCCCTGCATGTGGTGGCCAATGCCCAGAAGAAGGGTGGCGTGGC
CGCATACATTGACGCCGAGCACGCGCTCGATCCGGCCTATGCTCGCAAACTTGGCGTGGACACTGATTCGCTTATCGTTT
CTCAGCCGGACAACGGCGAACAGGCTCTTGAGATTGCAGACATGCTGATTCGTTCTGGCGCGCTTGATGTCATCGTTATC
GATTCGGTGGCGGCTCTGGTGCCAAAGGCCGAGATCGAAGGCGAGATGGGAGACAGCCACGTCGGTTTGCAGGCCCGACT
CATGAGCCAGGCTCTGCGCAAGATGACCGGTGCCTTGGCCCAAGCAGGTACCACCGCCATCTTCATCAACCAGCTACGCG
AAAAGATCGGCGTGTTCTTCGGTAATCCCGAAACCACTACCGGTGGCAAGGCTCTGAAGTTCTATGCCTCTGTGCGTCTT
GACATTCGCCGTATCCAGACCTTGAAGAACGGTGATGAAGCGGTGGGCAACCGTACGCGCGTCAAGGTGGTCAAGAACAA
GATGGCCCCGCCCTTCAAGTCCGCCGAATTCGACATGCTTTACGGCGAAGGTATCTCCCGCGAAGGTTCGGTCATCGACA
TGGCCCAACAGGTCGGCGTGGTCAAGAAGTCCGGCTCGTGGTTCACCTATGAGGGCGACCAGCTTGGTCAGGGTCGAGAG
AAGGTTCGTCAGTTCCTCAAGGACAACCCGGCCATCACCGAAGAGATTGAAAACAAGGTCAAGGCAGAATTTGGTTTGAT
CGGTTCCGCCGATCAGTTTGCCGAAGACGAAGACGCTGCTGCAGCTGCCGCAGTCAGCGAGGCCGCTGCGGCCGATGCCG
CCAAGGACACCAAGGCCACTGCAGCGCCTGCCGCCAAGTCGTCTCGCGCCAAGGCCCGATCATGA
Similar proteins
Only experimentally validated proteins are listed.