Detailed information NTG1023244

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AB3G50_RS08285
• Genome accession: NZ_CP161989
• Coordinates: 1731357..1732058 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594588.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain SIMBA028
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1726357..1737058

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3G50_RS08250 (AB3G50_08250)	kdsB	1726880..1727641 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AB3G50_RS08255 (AB3G50_08255)	-	1727653..1728633 (+)	981	WP_001075419.1	DNA polymerase III subunit delta'	-
AB3G50_RS08260 (AB3G50_08260)	-	1728645..1728986 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
AB3G50_RS08265 (AB3G50_08265)	-	1729004..1729777 (+)	774	WP_000497301.1	TatD family hydrolase	-
AB3G50_RS08270 (AB3G50_08270)	-	1729815..1730423 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AB3G50_RS08275 (AB3G50_08275)	-	1730433..1730987 (+)	555	WP_000841372.1	type II secretion system protein	-
AB3G50_RS08280 (AB3G50_08280)	xcpV	1730977..1731357 (+)	381	WP_000836909.1	type II secretion system minor pseudopilin GspI	Machinery gene
AB3G50_RS08285 (AB3G50_08285)	xcpW	1731357..1732058 (+)	702	WP_000594588.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AB3G50_RS08290 (AB3G50_08290)	gspK	1732058..1733017 (+)	960	WP_001218621.1	type II secretion system minor pseudopilin GspK	-
AB3G50_RS08295 (AB3G50_08295)	-	1733247..1733843 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
AB3G50_RS08300 (AB3G50_08300)	ung	1733894..1734607 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
AB3G50_RS08305 (AB3G50_08305)	-	1734604..1735728 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AB3G50_RS08310 (AB3G50_08310)	tadA	1735735..1736238 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
AB3G50_RS08315 (AB3G50_08315)	-	1736308..1736751 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26625.55 Da
• Isoelectric Point: 9.3468

>NTDB_id=1023244 AB3G50_RS08285 WP_000594588.1 1731357..1732058(+) (xcpW) [Acinetobacter baumannii strain SIMBA028]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQDGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1023244 AB3G50_RS08285 WP_000594588.1 1731357..1732058(+) (xcpW) [Acinetobacter baumannii strain SIMBA028]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATACCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGACGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991