Detailed information NTG1023045

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: AB2M34_RS03530
• Genome accession: NZ_CP161903
• Coordinates: 676600..677193 (-)
• Length: 197 a.a.
• NCBI ID: WP_003228214.1
• Uniprot ID: A0A199WEF2
• Organism: Bacillus subtilis strain DYJ24
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 671600..682193

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2M34_RS03515 (AB2M34_03515)	mdxK	671915..674188 (+)	2274	WP_103330086.1	maltose phosphorylase	-
AB2M34_RS03520 (AB2M34_03520)	malL	674181..675866 (+)	1686	WP_033881298.1	oligo-1,6-glucosidase	-
AB2M34_RS03525 (AB2M34_03525)	pgmB	675863..676537 (+)	675	WP_014480982.1	beta-phosphoglucomutase	-
AB2M34_RS03530 (AB2M34_03530)	clpP	676600..677193 (-)	594	WP_003228214.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
AB2M34_RS03540 (AB2M34_03540)	yvdQ	677697..678205 (+)	509	Protein_702	DUF3231 family protein	-
AB2M34_RS03545 (AB2M34_03545)	psmB	678241..678561 (-)	321	WP_014480967.1	QacE family quaternary ammonium compound efflux SMR transporter	-
AB2M34_RS03550 (AB2M34_03550)	psmA	678561..678896 (-)	336	WP_014480966.1	SMR family transporter	-
AB2M34_RS03555 (AB2M34_03555)	-	678978..679562 (-)	585	WP_003228226.1	TetR family transcriptional regulator	-
AB2M34_RS03560 (AB2M34_03560)	aspP	679657..681219 (-)	1563	WP_003228228.1	aspartate/proton symporter AspP	-

Sequence

Protein

• Length: 197 a.a.
• Molecular weight: 21682.00 Da
• Isoelectric Point: 4.9416

>NTDB_id=1023045 AB2M34_RS03530 WP_003228214.1 676600..677193(-) (clpP) [Bacillus subtilis strain DYJ24]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK

Nucleotide

• Length: 594 bp

>NTDB_id=1023045 AB2M34_RS03530 WP_003228214.1 676600..677193(-) (clpP) [Bacillus subtilis strain DYJ24]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCTTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCACTTGGCGGTGCGCAAGGTCAGGCGA
CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAACTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A199WEF2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	100	100	1
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.617	95.431	0.655
clpP	Streptococcus thermophilus LMG 18311	58.163	99.492	0.579
clpP	Streptococcus thermophilus LMD-9	58.163	99.492	0.579
clpP	Streptococcus pneumoniae D39	57.812	97.462	0.563
clpP	Streptococcus pneumoniae Rx1	57.812	97.462	0.563
clpP	Streptococcus pneumoniae R6	57.812	97.462	0.563
clpP	Streptococcus pneumoniae TIGR4	57.812	97.462	0.563
clpP	Lactococcus lactis subsp. cremoris KW2	57.895	96.447	0.558
clpP	Streptococcus pyogenes JRS4	56.122	99.492	0.558
clpP	Streptococcus pyogenes MGAS315	56.122	99.492	0.558
clpP	Streptococcus mutans UA159	54.822	100	0.548
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.789	96.447	0.538