Detailed information NTG1021127

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABZP31_RS05520
• Genome accession: NZ_CP160437
• Coordinates: 1210984..1211607 (+)
• Length: 207 a.a.
• NCBI ID: WP_248134268.1
• Uniprot ID: -
• Organism: Acinetobacter sp. FL
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1205984..1216607

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZP31_RS05485 (ABZP31_05485)	kdsB	1206446..1207207 (+)	762	WP_248134274.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ABZP31_RS05490 (ABZP31_05490)	-	1207225..1208208 (+)	984	WP_248134272.1	DNA polymerase III subunit delta' C-terminal domain-containing protein	-
ABZP31_RS05495 (ABZP31_05495)	-	1208227..1208568 (+)	342	WP_005014707.1	PilZ domain-containing protein	-
ABZP31_RS05500 (ABZP31_05500)	-	1208612..1209385 (+)	774	WP_248134270.1	TatD family hydrolase	-
ABZP31_RS05505 (ABZP31_05505)	-	1209425..1210033 (+)	609	WP_101162145.1	TetR/AcrR family transcriptional regulator	-
ABZP31_RS05510 (ABZP31_05510)	-	1210048..1210611 (+)	564	WP_101162146.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
ABZP31_RS05515 (ABZP31_05515)	xcpV	1210601..1210987 (+)	387	WP_005025576.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABZP31_RS05520 (ABZP31_05520)	xcpW	1210984..1211607 (+)	624	WP_248134268.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABZP31_RS05525 (ABZP31_05525)	gspK	1211641..1212585 (+)	945	WP_248134266.1	type II secretion system minor pseudopilin GspK	-
ABZP31_RS05530 (ABZP31_05530)	-	1212682..1213278 (+)	597	WP_101162150.1	6-carboxytetrahydropterin synthase	-
ABZP31_RS05535 (ABZP31_05535)	ung	1213323..1214036 (+)	714	WP_101162151.1	uracil-DNA glycosylase	-
ABZP31_RS05540 (ABZP31_05540)	-	1214033..1215157 (+)	1125	WP_111280930.1	enoyl-CoA hydratase/isomerase family protein	-
ABZP31_RS05545 (ABZP31_05545)	tadA	1215161..1215652 (+)	492	WP_248134263.1	tRNA adenosine(34) deaminase TadA	-
ABZP31_RS05550 (ABZP31_05550)	-	1215735..1216169 (+)	435	WP_248134261.1	SRPBCC family protein	-

Sequence

Protein

• Length: 207 a.a.
• Molecular weight: 23653.05 Da
• Isoelectric Point: 7.1980

>NTDB_id=1021127 ABZP31_RS05520 WP_248134268.1 1210984..1211607(+) (xcpW) [Acinetobacter sp. FL]
MKYKRGFTLVELLVAIAIFAALSALGWKVFNYLIKVKERNSIHEQNLARLQEAYQQILRDSLQLIPLTANNGGELRPALE
LNDQHFIFSKAGVTDPLGQGLGPYERIEYQYSSADQKLYRLKYQNLNTPTAIQPQSSVLLDQVEQYRISVLNPAELNRWP
EGVLDPASQSEQLKILPRGFKINLTINGTEYEWIYSLLNTGDLKEKQ

Nucleotide

• Length: 624 bp

>NTDB_id=1021127 ABZP31_RS05520 WP_248134268.1 1210984..1211607(+) (xcpW) [Acinetobacter sp. FL]
ATGAAATATAAACGGGGTTTTACTCTGGTGGAGCTGTTGGTCGCGATTGCGATTTTTGCAGCACTCTCTGCGCTGGGTTG
GAAGGTCTTTAATTATCTGATCAAAGTAAAAGAACGAAATAGTATACATGAGCAAAATCTTGCCCGGTTACAGGAAGCTT
ATCAGCAAATCTTACGTGACAGCCTGCAGCTGATTCCATTAACTGCAAATAATGGAGGAGAGTTGCGTCCTGCACTTGAA
TTAAACGATCAGCATTTTATTTTTAGTAAAGCTGGTGTAACTGATCCTTTGGGCCAGGGGCTGGGGCCTTATGAGCGGAT
CGAATATCAATACAGTAGTGCAGACCAGAAACTGTACCGGTTAAAATATCAAAACCTGAATACTCCAACCGCTATTCAGC
CCCAGTCAAGTGTGCTTCTTGATCAGGTCGAGCAATACCGGATTAGCGTCTTAAATCCTGCTGAACTAAACAGATGGCCT
GAAGGCGTATTAGACCCTGCTTCCCAATCAGAACAGCTTAAAATTCTACCGCGCGGTTTTAAAATCAATCTGACTATAAA
TGGAACTGAATACGAATGGATTTACAGCCTTTTAAATACAGGTGATTTAAAAGAAAAACAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (59-190)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	64.356	97.585	0.628