Detailed information NTG1020433

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ABUW22_RS02530
• Genome accession: NZ_CP160326
• Coordinates: 553910..555184 (-)
• Length: 424 a.a.
• NCBI ID: WP_370387643.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Acer01
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 548910..560184

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABUW22_RS02525 (ABUW22_14690)	-	550613..553561 (-)	2949	WP_370387642.1	reverse transcriptase domain-containing protein	-
ABUW22_RS02530 (ABUW22_07075)	pilA	553910..555184 (-)	1275	WP_370387643.1	signal recognition particle-docking protein FtsY	Machinery gene
ABUW22_RS02535 (ABUW22_07085)	-	555593..556141 (-)	549	WP_367419238.1	5'-3'-deoxyribonucleotidase	-
ABUW22_RS02540 (ABUW22_07090)	ruvA	556183..556761 (-)	579	WP_370387644.1	Holliday junction branch migration protein RuvA	-
ABUW22_RS02545 (ABUW22_07095)	-	556840..557553 (-)	714	WP_100141055.1	septal ring lytic transglycosylase RlpA family protein	-
ABUW22_RS02550 (ABUW22_07100)	-	557914..558624 (-)	711	WP_367419242.1	ComF family protein	-
ABUW22_RS02555 (ABUW22_07105)	bioH	558623..559375 (+)	753	WP_367419244.1	pimeloyl-ACP methyl ester esterase BioH	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 45417.50 Da
• Isoelectric Point: 4.5714

>NTDB_id=1020433 ABUW22_RS02530 WP_370387643.1 553910..555184(-) (pilA) [Snodgrassella alvi strain Acer01]
MFGFFKRKKNTEPEQEQASVNPAQPESVEQPDTAAETHTQPEPAATHQSVEEHTANAAVSESTATETTEDIIVPAAVDEP
AAIATSTESEVVQAPASENTIVIPVETTEIPSETDKPARLGWAARLKQGLSKSRNQMAKSLASVFGGGKIDEDLYEELET
VLLTSDMGIEATEKLLAQVRQRVTLKGLKNGNELRSALKEALYELLQPLQQPLSIPIDKKPFVIMMAGVNGAGKTTSIGK
LAKYFQSQGKSVLLAAGDTFRAAAREQLQQWGERNNVTVIAQESGDSAAVCFDALEAAKARGIDIVLADTAGRLPTQLHL
MEEIKKVKRVLQKSLPEAPHEVMLVLDANVGQNAINQVVAFDDALGLTGLIVSKLDGTAKGGILAALAAKRPIPVRFIGV
GEGIDDLRPFDAKAFVDALIEDEE

Nucleotide

• Length: 1275 bp

>NTDB_id=1020433 ABUW22_RS02530 WP_370387643.1 553910..555184(-) (pilA) [Snodgrassella alvi strain Acer01]
ATGTTTGGATTTTTTAAAAGAAAAAAAAATACAGAGCCAGAGCAAGAACAAGCCAGCGTTAACCCCGCGCAGCCGGAATC
AGTAGAGCAACCCGATACAGCGGCTGAAACTCATACTCAGCCTGAACCGGCTGCTACTCACCAAAGCGTAGAAGAGCACA
CAGCGAATGCAGCCGTCTCCGAATCTACAGCTACCGAAACAACAGAAGACATCATCGTACCGGCAGCCGTAGATGAACCA
GCCGCCATTGCCACCAGCACGGAATCAGAAGTTGTTCAGGCTCCGGCCAGCGAAAACACCATAGTGATTCCAGTAGAAAC
CACAGAAATACCTAGCGAAACAGACAAACCAGCTCGACTGGGCTGGGCAGCACGGCTCAAACAGGGTCTAAGCAAATCGC
GCAACCAGATGGCCAAATCGCTGGCGTCTGTATTTGGTGGCGGCAAAATCGATGAAGACCTGTACGAAGAGCTGGAAACA
GTATTGCTCACCAGTGATATGGGTATCGAAGCCACCGAAAAACTACTGGCACAGGTACGCCAGCGCGTTACCCTGAAAGG
ATTGAAAAACGGAAACGAACTGCGCAGCGCCCTGAAAGAAGCCTTATATGAATTACTGCAGCCACTTCAGCAGCCTTTGT
CCATACCTATTGATAAAAAACCTTTTGTTATCATGATGGCTGGTGTAAACGGAGCAGGCAAAACCACCAGTATCGGCAAA
CTGGCCAAATATTTTCAAAGTCAGGGTAAAAGTGTCCTGCTGGCCGCTGGCGACACATTCCGCGCAGCTGCGCGCGAGCA
ATTACAGCAATGGGGTGAGCGCAATAACGTAACCGTAATTGCGCAGGAATCCGGTGATTCTGCCGCCGTCTGCTTCGATG
CCCTTGAAGCAGCCAAAGCACGTGGTATCGATATCGTACTGGCTGATACCGCTGGCCGCTTGCCAACCCAGCTGCATCTA
ATGGAAGAAATCAAAAAAGTAAAACGCGTGTTGCAAAAATCATTACCCGAAGCACCACACGAAGTCATGCTGGTACTCGA
TGCCAACGTCGGCCAGAACGCTATCAATCAAGTAGTCGCTTTCGACGACGCCCTTGGCTTAACCGGCCTGATCGTTTCTA
AACTGGATGGCACCGCAAAAGGCGGTATCCTCGCCGCACTGGCCGCCAAACGCCCGATACCAGTACGCTTCATCGGTGTA
GGCGAAGGCATCGACGATTTACGCCCGTTTGACGCCAAAGCATTTGTAGATGCATTGATTGAGGATGAGGAATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (137-202)

• SRP54-type protein, GTPase domain (SRP54) (221-420)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	65.094	100	0.651