Detailed information NTG1020061

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB0R77_RS12580
• Genome accession: NZ_CP160226
• Coordinates: 2422607..2424991 (-)
• Length: 794 a.a.
• NCBI ID: WP_041118108.1
• Uniprot ID: -
• Organism: Bacillus safensis strain JJ1244
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2417607..2429991

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R77_RS12545 (AB0R77_12545)	-	2418606..2419334 (+)	729	WP_024423116.1	amino acid ABC transporter ATP-binding protein	-
AB0R77_RS12550 (AB0R77_12550)	-	2419348..2420157 (+)	810	WP_046311901.1	transporter substrate-binding domain-containing protein	-
AB0R77_RS12555 (AB0R77_12555)	-	2420235..2420888 (+)	654	WP_024427868.1	amino acid ABC transporter permease	-
AB0R77_RS12560 (AB0R77_12560)	-	2420904..2421554 (+)	651	WP_024427867.1	amino acid ABC transporter permease	-
AB0R77_RS12565 (AB0R77_12565)	-	2421658..2421789 (-)	132	WP_003216198.1	YrzQ family protein	-
AB0R77_RS12570 (AB0R77_12570)	-	2421810..2422001 (-)	192	WP_003216308.1	hypothetical protein	-
AB0R77_RS12575 (AB0R77_12575)	-	2422015..2422533 (-)	519	WP_051582016.1	PRC-barrel domain-containing protein	-
AB0R77_RS12580 (AB0R77_12580)	recD2	2422607..2424991 (-)	2385	WP_041118108.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB0R77_RS12585 (AB0R77_12585)	-	2425011..2425664 (-)	654	WP_034279920.1	tetratricopeptide repeat protein	-
AB0R77_RS12590 (AB0R77_12590)	mnmA	2425724..2426842 (-)	1119	WP_024423123.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB0R77_RS12595 (AB0R77_12595)	-	2426937..2428079 (-)	1143	WP_046311904.1	cysteine desulfurase family protein	-
AB0R77_RS12600 (AB0R77_12600)	-	2428098..2428517 (-)	420	WP_024423125.1	Rrf2 family transcriptional regulator	-
AB0R77_RS12605 (AB0R77_12605)	-	2428726..2429991 (+)	1266	WP_025092426.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89101.69 Da
• Isoelectric Point: 5.3289

>NTDB_id=1020061 AB0R77_RS12580 WP_041118108.1 2422607..2424991(-) (recD2) [Bacillus safensis strain JJ1244]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIRCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=1020061 AB0R77_RS12580 WP_041118108.1 2422607..2424991(-) (recD2) [Bacillus safensis strain JJ1244]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTAAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTTTATGGCAAAGTGACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCAACAACGAAGCAAGGAATCATACATTATCTCTCAAGTGATTTATT
TGAAGGGATAGGGAAAAAGACGGCTGAAGAAATCGTCGGGAAGCTTGGCAATCAGACGCTTCATAAGATTATGCGTGACC
CAGCTGTTTTGTATGATGTACCGCGCTTATCAAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATCATGATCAGCCTGAATCAGTATGGCTTTGGTCCGCAGCTCAGCATGAAGATTTACCAAGTATACGAGAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAGCTTGTCAAGGATGTCGAGGGAATCGGATTTATTAAGGCGGATG
AGCTTGGTGCTAGAACAGGCATCTCAGGTAATGACCCAGAGCGGATTCGCGCCGCCTTGCTATATACAGTGGAGACAGCC
AGTCTACAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAACTGCTCAACCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGACG
ACCGCTGCTATCATCCATCCTTATTTTATGCAGAACAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTGCTAGCACTTGGCGAGCTGGAGGAGCGGTTAGGCGTCCAATATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGGCCTGGAACAGGGAAGACGA
CGGTCATTAAAGGAATTGTCGAGCTTTACAGTGATCTTCACGGTGTTTCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCCTTCCCATTTGTGCTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAACGGTTCGGAGGGCTTCTCGCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCGATTCCTGATCATATCCAAGTGATT
ATGGTAGGAGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCCGTGCC
GGCTGTTACCCTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTGGCACATGATATGAAAAATGGTG
TGCTGCCAAAGGATATTACTGCACGCTCAAAGGATCGGTCCTTCATTCGGTGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTTGTCAGCAATGCTGCTCAAAAAGGATTTTCGGCAAAGGACATTCAAGTGCTCGCACCAATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGCGATATC
GGCGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCCGTGATCTCCTTTGATGGGAATGA
AATCACCTTTACAAAAAAGGATTTTCATCAATTTACACATGCTTATTGCTGCTCCATTCACAAATCACAAGGAAGTGAAT
TCCCGATTGTTGTGCTGCCAGTCGTCAGGAGCTATTACCGAATGCTTCGGCGGAATCTGCTGTACACAGCCATTACACGC
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAATGGGGTGTGAAAAACAATGAGGATTCCCTTAGACA
AACGTCCTTAACGATGCGGCTAGTGCAAACCGAACAAATCATGGATGCAGAACTTGAAGCGCTCCAAAAAGAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCATTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.899	100	0.801