Detailed information NTG1016501

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ABYA78_RS27385
• Genome accession: NZ_CP159883
• Coordinates: 5733491..5734828 (+)
• Length: 445 a.a.
• NCBI ID: WP_003094694.1
• Uniprot ID: A0A0H2ZG94
• Organism: Pseudomonas aeruginosa strain 100690
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 5728491..5739828

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABYA78_RS27360 (ABYA78_27360)	pgeF	5728634..5729362 (-)	729	WP_043096283.1	peptidoglycan editing factor PgeF	-
ABYA78_RS27365 (ABYA78_27365)	rluD	5729359..5730321 (-)	963	WP_003094686.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
ABYA78_RS27370 (ABYA78_27370)	-	5730467..5731492 (+)	1026	WP_003102590.1	outer membrane protein assembly factor BamD	-
ABYA78_RS27375 (ABYA78_27375)	-	5731649..5731894 (+)	246	WP_003102591.1	PP0621 family protein	-
ABYA78_RS27380 (ABYA78_27380)	pilS	5731884..5733476 (+)	1593	WP_003110428.1	two-component system sensor histidine kinase PilS	Regulator
ABYA78_RS27385 (ABYA78_27385)	pilR	5733491..5734828 (+)	1338	WP_003094694.1	two-component system response regulator PilR	Regulator
ABYA78_RS27390 (ABYA78_27390)	thiO	5734874..5735968 (-)	1095	WP_023084775.1	glycine oxidase ThiO	-
ABYA78_RS27395 (ABYA78_27395)	-	5736103..5736612 (+)	510	WP_043096282.1	Tfp pilus assembly protein FimT/FimU	-
ABYA78_RS27400 (ABYA78_27400)	-	5736718..5737224 (+)	507	WP_003102598.1	Tfp pilus assembly protein FimT/FimU	-
ABYA78_RS27405 (ABYA78_27405)	pilV	5737215..5737772 (+)	558	WP_003119423.1	type 4a pilus minor pilin PilV	Machinery gene
ABYA78_RS27410 (ABYA78_27410)	pilW	5737769..5738593 (+)	825	WP_003119422.1	type 4a pilus minor pilin PilW	-
ABYA78_RS27415 (ABYA78_27415)	pilX	5738590..5739177 (+)	588	WP_003112826.1	type 4a pilus minor pilin PilX	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49737.06 Da
• Isoelectric Point: 5.8654

>NTDB_id=1016501 ABYA78_RS27385 WP_003094694.1 5733491..5734828(+) (pilR) [Pseudomonas aeruginosa strain 100690]
MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLAREPFDLCLTDMRLPDGSGLDLVQYIQQRHPQTPVAM
ITAYGSLDTAIQALKAGAFDFLTKPVDLGRLRELVATALRLRNPEAEEAPVDNRLLGESPPMRALRNQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRIERPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAASGGTLFLDEVADLP
MAMQVKLLRAIQEKAVRAVGGQQEVAVDVRILCATHKDLAAEVGAGRFRQDLYYRLNVIELRVPPLRERREDIPLLAERI
LKRLAGDTGLPAARLTGDAQEKLKNYRFPGNVRELENMLERAYTLCEDDQIQPHDLRLADAPGASQEGAASLSEIDNLED
YLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1338 bp

>NTDB_id=1016501 ABYA78_RS27385 WP_003094694.1 5733491..5734828(+) (pilR) [Pseudomonas aeruginosa strain 100690]
ATGAGCCGACAAAAAGCCCTGATCGTCGACGATGAACCGGATATCCGCGAACTGCTGGAAATCACTCTCGGCCGCATGAA
GCTGGACACCCGCAGCGCCCGCAACGTCAAGGAAGCCCGCGAGTTGCTGGCCCGCGAGCCGTTCGACCTGTGCCTCACCG
ACATGCGCCTGCCGGACGGCAGCGGCCTCGATCTGGTCCAGTACATCCAGCAGCGCCATCCACAGACCCCGGTGGCCATG
ATCACCGCGTACGGCAGCCTGGACACCGCGATCCAGGCGCTCAAGGCCGGTGCCTTCGACTTCCTCACCAAACCGGTCGA
CCTCGGTCGCTTGCGGGAGCTGGTGGCAACCGCCCTGCGCTTGCGCAACCCGGAAGCCGAGGAAGCGCCGGTGGACAACC
GCCTGCTCGGCGAGTCGCCGCCGATGCGCGCCCTGCGCAACCAGATCGGCAAGCTGGCGCGCAGCCAGGCGCCGGTCTAC
ATCAGTGGCGAGTCCGGCAGCGGCAAGGAGCTGGTGGCGCGCCTGATCCACGAGCAGGGGCCACGTATCGAGCGGCCGTT
CGTGCCGGTGAACTGCGGCGCGATTCCCTCCGAACTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCACTG
GCGCTATCGAAGACAAGCAGGGCCTGTTCCAGGCCGCCAGCGGCGGCACCCTGTTCCTCGACGAAGTCGCCGACCTGCCG
ATGGCCATGCAGGTCAAACTGCTCCGTGCGATCCAGGAAAAGGCCGTGCGCGCGGTCGGCGGCCAGCAGGAGGTCGCCGT
CGACGTGCGCATCCTCTGCGCCACCCACAAGGACCTCGCCGCCGAAGTCGGCGCCGGGCGCTTCCGCCAGGACCTCTACT
ACCGCCTCAACGTCATCGAGCTGCGCGTACCGCCGCTGCGCGAACGCCGCGAGGACATCCCGCTGCTCGCCGAACGCATC
CTCAAGCGCCTGGCCGGCGACACCGGCCTGCCGGCCGCCAGGCTGACCGGCGACGCACAGGAGAAGCTGAAGAACTACCG
CTTCCCGGGCAACGTCCGCGAGCTGGAAAACATGCTGGAGCGCGCCTACACCCTGTGCGAAGACGACCAGATCCAGCCTC
ACGACCTGCGCCTGGCCGATGCGCCGGGTGCCAGCCAGGAAGGCGCCGCGAGCCTGAGCGAAATAGACAACCTCGAGGAC
TACCTGGAAGACATCGAGCGCAAGCTGATCATGCAGGCGCTCGAGGAGACCCGCTGGAACCGCACCGCCGCGGCCCAGCG
CCTGGGCCTGACGTTCCGCTCGATGCGCTACCGCCTGAAAAAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

3D structure

• AlphaFold DB: A0A0H2ZG94

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	100	100	1
pilR	Acinetobacter baumannii strain A118	51.198	100	0.528
luxO	Vibrio cholerae strain A1552	38.17	100	0.384