Detailed information NTG1011017

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: LLUC023_RS09515
• Genome accession: NZ_CP158368
• Coordinates: 1868135..1868644 (-)
• Length: 169 a.a.
• NCBI ID: WP_021165649.1
• Uniprot ID: -
• Organism: Lactococcus cremoris strain UC023
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1863135..1873644

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLUC023_RS09480 (LLUC023_09490)	-	1863575..1864102 (-)	528	WP_014572213.1	F0F1 ATP synthase subunit delta	-
LLUC023_RS09485 (LLUC023_09495)	atpF	1864104..1864610 (-)	507	WP_010906128.1	F0F1 ATP synthase subunit B	-
LLUC023_RS09490 (LLUC023_09500)	atpB	1864625..1865338 (-)	714	WP_004255255.1	F0F1 ATP synthase subunit A	-
LLUC023_RS09495 (LLUC023_09505)	-	1865385..1865600 (-)	216	WP_014572212.1	F0F1 ATP synthase subunit C	-
LLUC023_RS09500 (LLUC023_09510)	-	1865783..1866559 (-)	777	WP_014572211.1	alpha/beta hydrolase family protein	-
LLUC023_RS09505 (LLUC023_09515)	-	1866843..1867148 (-)	306	Protein_1853	ComEC/Rec2 family competence protein	-
LLUC023_RS09510 (LLUC023_09520)	-	1867169..1868058 (-)	890	Protein_1854	IS982 family transposase	-
LLUC023_RS09515 (LLUC023_09525)	comEC	1868135..1868644 (-)	510	WP_021165649.1	MBL fold metallo-hydrolase	Machinery gene
LLUC023_RS09520 (LLUC023_09530)	comEC	1868685..1870058 (-)	1374	WP_282667713.1	ComEC/Rec2 family competence protein	Machinery gene
LLUC023_RS09525 (LLUC023_09535)	comEA	1870039..1870485 (-)	447	WP_282675405.1	ComEA family DNA-binding protein	Machinery gene
LLUC023_RS09530 (LLUC023_09540)	-	1870751..1872112 (-)	1362	WP_014572203.1	ABC transporter permease	-
LLUC023_RS09535 (LLUC023_09545)	-	1872109..1873041 (-)	933	WP_014572202.1	ABC transporter ATP-binding protein	-
LLUC023_RS09540 (LLUC023_09550)	-	1873147..1873545 (-)	399	WP_011676775.1	hypothetical protein	-

Sequence

Protein

• Length: 169 a.a.
• Molecular weight: 18923.62 Da
• Isoelectric Point: 6.9787

>NTDB_id=1011017 LLUC023_RS09515 WP_021165649.1 1868135..1868644(-) (comEC) [Lactococcus cremoris strain UC023]
MRASITAVDIGQGDSIFLQDKFNKENILIDTGGRLALPQKNWQKAQTQSNADKTLIPYLESMGVAHIDQLILTHTDADHV
GDFLSLADKIKIREIWISPGELTNISFVEKLKKAKIPIHVSKVGDKIPIFDSFLQVLSNGYTKKGDNNDSIVTYGNFYHT
KFLFTDPNC

Nucleotide

• Length: 510 bp

>NTDB_id=1011017 LLUC023_RS09515 WP_021165649.1 1868135..1868644(-) (comEC) [Lactococcus cremoris strain UC023]
ATGAGAGCAAGCATTACAGCAGTTGATATCGGACAAGGAGATAGTATTTTTCTACAAGATAAGTTTAATAAAGAAAACAT
TCTGATTGATACTGGGGGACGACTTGCTCTTCCTCAAAAAAATTGGCAAAAAGCGCAGACGCAATCAAATGCTGACAAAA
CGCTTATCCCTTATTTAGAATCCATGGGGGTGGCTCATATTGACCAACTTATTCTGACTCATACAGATGCTGACCATGTT
GGCGATTTCTTGTCCTTAGCTGATAAAATAAAAATAAGAGAAATCTGGATCAGTCCGGGAGAATTAACCAACATTAGTTT
TGTGGAAAAATTAAAAAAAGCAAAAATTCCGATTCATGTTAGTAAAGTTGGGGATAAAATTCCGATTTTTGATAGTTTTC
TTCAAGTTTTATCAAATGGTTACACTAAAAAAGGGGATAATAATGATTCCATAGTGACTTATGGAAACTTTTACCATACA
AAATTTCTTTTTACAGACCCGAATTGCTAG

Domains

Predicted by InterProScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (11-99)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	98.788	97.633	0.964
comEC/celB	Streptococcus mitis SK321	46.707	98.817	0.462
comEC/celB	Streptococcus pneumoniae TIGR4	44.91	98.817	0.444
comEC/celB	Streptococcus pneumoniae Rx1	44.311	98.817	0.438
comEC/celB	Streptococcus pneumoniae D39	44.311	98.817	0.438
comEC/celB	Streptococcus pneumoniae R6	44.311	98.817	0.438
comEC/celB	Streptococcus mitis NCTC 12261	43.713	98.817	0.432
comEC	Latilactobacillus sakei subsp. sakei 23K	38.037	96.45	0.367