Detailed information NTG1010106

Bioinformatically predicted

Overview

• Name: rexA
• Type: Machinery gene
• Locus tag: H0513_RS08680
• Genome accession: NZ_LR822023
• Coordinates: 1659510..1663163 (-)
• Length: 1217 a.a.
• NCBI ID: WP_179972260.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_368
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1654510..1668163

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0513_RS08660 (STHERMO_1966)	proB	1654862..1655665 (-)	804	WP_179972256.1	glutamate 5-kinase	-
H0513_RS08665 (STHERMO_1967)	-	1655788..1657377 (-)	1590	WP_179972257.1	ABC transporter permease	-
H0513_RS08670 (STHERMO_1968)	pptA	1657380..1658111 (-)	732	WP_179972258.1	ABC transporter ATP-binding protein	Regulator
H0513_RS08675 (STHERMO_1970)	-	1658385..1659116 (+)	732	WP_179972259.1	DUF554 domain-containing protein	-
H0513_RS08680 (STHERMO_1971)	rexA	1659510..1663163 (-)	3654	WP_179972260.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
H0513_RS08685 (STHERMO_1972)	rexB	1663153..1666473 (-)	3321	WP_179972261.1	ATP-dependent nuclease subunit B	Machinery gene
H0513_RS11195 (STHERMO_1973)	-	1666965..1667614 (-)	650	Protein_1648	hypothetical protein	-
H0513_RS08695	-	1667621..1668086 (-)	466	Protein_1649	LytTR family DNA-binding domain-containing protein	-

Sequence

Protein

• Length: 1217 a.a.
• Molecular weight: 138369.59 Da
• Isoelectric Point: 4.8259

>NTDB_id=1010106 H0513_RS08680 WP_179972260.1 1659510..1663163(-) (rexA) [Streptococcus thermophilus isolate STH_CIRM_368]
MLTKAFLSPAEIEERIAQEAASDKDCKLTPEQIEAIYSNGTNILVSASAGSGKTFVMVERILDMIGRGVSIDQLFISTFT
VKAAGELKERLEKRLTKHLGQAETDEERAFLSEQIAKIGTADIGTMDAFTQKLVNQYGYLLGVSPTFRIMTDLAEQTLMK
NEVYADLFNDYMQGKDAQLFQKLVRNFTGHSKTSKAFRDLVYDIYSFSQATADPEKWLRQNLLKGQIEAKPEQAKNELLN
GLKDGLLADFLAFLRDHLGIAQREFAKAKYLNNVSDAIILLEGSLINDQTDMEDLLKQLLTLSGGTGLTNMTRPKDEELK
AYKEAYNKTKNEFVAQLREVDTQLTVLEVLTKHNDDILPMLELLQSFILDFSDQYLQAKIQENTFEFSDIAHFAIRILEE
NPEVAVSYRDRYHEVMVDEYQDNSHTQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNGKFQLFLENPDAGKLILL
KENFRSQSEVIDATNGVFSHLMDQEIGDILYDKTHMLVAGSQKQKEPHPENETEVLIYNSDESSTSEDEEGPDQAISSGE
ISLVIKEIIKLHEQGVRFEDITLLAPNRNTYLDLMVSFEEHGIPLVPDEYKSSYLESLEVMIMLDTLRAINNPLNDYALV
ALLRSPMFNFNEDDLTRIAVQADKGQFYDKLLAAHTKSGLYPEVVTQGLDAKLTLFTETLADWRDYGKCHSIYDLIWKIY
NDRFYYDYVGGLPRAEQRQANLYALALRANAYEKTGFKGLSRFIGMIDKIIASGNDLEEVTDLVPKNAVSLMTIHKSKGL
EFKYVFVLQMNRKFIGHSKDGLSGKYIINREKGLGIKYLADLKDQINTNLPKLNVVLETLTFQENRREERRASISEEMRL
LYVAMTRAKKKLYLVGKGSKETLTQQYGTDVENNRLPVALRDQIATYQDWIMALDTAFMRKNLKFTVRFIEDEELTPEAI
GQVEVKAAVDADDLSNNRQTEEIERALTVLESVEKLNHLYAPAINLPSVRTPSQLKTFYEPIMDTEGVDIMDKKEGVQPL
ETASTFELPDFGQKTKVTGAAVGSATHELMQRLTLSDTVTLQDLTQALSRVSASDQVKARVQLKKLLGFFDTELGKLILA
NRDKLRREAPFAMLAEDPASKEDFVVRGIIDGYLLLEDRIVLFDYKTDHFTRPSELRTRYQGQMSLYAKALSQAYQIEKV
DKYLILLGGKDLEVVEI

Nucleotide

• Length: 3654 bp

>NTDB_id=1010106 H0513_RS08680 WP_179972260.1 1659510..1663163(-) (rexA) [Streptococcus thermophilus isolate STH_CIRM_368]
ATGTTGACTAAAGCTTTTTTAAGTCCAGCAGAGATTGAGGAACGTATTGCCCAAGAAGCAGCTTCTGACAAGGATTGCAA
GTTAACACCTGAACAGATTGAAGCTATTTACAGTAATGGTACTAATATTTTGGTATCTGCCTCAGCTGGTTCAGGGAAAA
CCTTTGTCATGGTTGAGCGTATCCTTGATATGATTGGACGTGGCGTTAGTATTGATCAACTCTTTATCTCAACCTTTACG
GTAAAAGCTGCAGGTGAGTTAAAGGAGCGTCTAGAAAAGCGGCTGACAAAGCATTTAGGACAGGCAGAGACGGATGAGGA
GCGGGCATTTCTTTCAGAACAGATTGCCAAGATTGGGACGGCTGATATTGGAACCATGGATGCCTTTACCCAGAAATTGG
TCAATCAGTATGGCTATCTCCTGGGTGTGTCACCTACTTTCCGTATCATGACAGACCTTGCTGAGCAGACGCTTATGAAA
AATGAGGTCTATGCTGATCTCTTCAATGATTACATGCAAGGAAAGGATGCCCAACTTTTTCAAAAATTGGTCCGTAATTT
CACTGGACATAGCAAAACTAGCAAGGCTTTTCGTGATTTAGTTTACGATATTTACAGCTTTTCTCAGGCTACTGCAGATC
CTGAAAAATGGCTACGTCAAAATCTCTTGAAAGGACAGATCGAGGCCAAGCCAGAACAGGCTAAAAATGAGCTTTTAAAC
GGTCTTAAAGATGGCTTGTTGGCTGATTTCCTAGCTTTCTTAAGAGACCATTTAGGTATAGCTCAGCGTGAATTTGCCAA
GGCCAAGTATCTGAATAATGTGTCAGATGCCATTATCCTTCTTGAGGGCTCCTTGATTAATGACCAAACTGATATGGAGG
ACCTCCTCAAACAACTATTGACTCTGTCAGGAGGTACTGGTTTGACCAATATGACCCGTCCTAAAGATGAGGAACTCAAG
GCCTACAAGGAAGCATACAACAAGACCAAAAATGAGTTTGTGGCTCAGTTGCGAGAGGTCGATACTCAGCTCACCGTTCT
GGAGGTTTTGACCAAGCATAATGATGACATCCTACCTATGTTGGAGCTACTTCAGTCCTTTATACTTGATTTTTCGGATC
AGTATTTACAGGCAAAGATTCAGGAAAATACCTTTGAATTCTCGGATATTGCTCACTTTGCTATCCGTATTTTGGAAGAA
AATCCAGAGGTGGCAGTCAGCTACCGTGACCGTTACCATGAAGTTATGGTGGATGAGTATCAGGACAATAGCCATACTCA
AGAACGAATGTTGGAACTTCTATCTAACGGTCATAACCGATTCATGGTGGGAGATATCAAGCAGTCCATTTATCGTTTCC
GTCAGGCAGACCCTCAGATTTTTAATGGTAAGTTTCAGCTTTTCCTTGAAAATCCTGATGCAGGTAAGCTGATTCTCCTT
AAGGAAAACTTTCGTAGTCAATCTGAAGTCATTGATGCGACAAATGGTGTTTTTAGCCACCTCATGGATCAGGAAATCGG
GGACATCCTATATGACAAGACTCATATGTTGGTAGCAGGTAGTCAGAAGCAAAAAGAGCCCCATCCTGAAAATGAAACTG
AGGTTCTGATTTATAATAGTGATGAATCTAGTACGAGTGAGGATGAAGAAGGTCCTGATCAAGCTATCAGCAGCGGTGAG
ATTTCCTTGGTTATCAAAGAAATTATCAAACTTCATGAGCAGGGTGTACGTTTTGAGGACATCACCCTCCTAGCACCGAA
CCGTAACACCTATCTGGACTTGATGGTAAGTTTCGAGGAACACGGGATTCCCTTGGTTCCTGACGAGTATAAGTCAAGCT
ACCTAGAGTCGCTAGAAGTTATGATTATGTTGGACACCCTTCGTGCTATCAATAATCCTCTTAACGATTATGCTCTCGTT
GCTCTCCTTCGTTCACCTATGTTTAACTTCAACGAGGATGACCTGACTCGTATCGCAGTTCAGGCTGACAAAGGCCAATT
CTATGATAAGCTTCTTGCAGCTCATACCAAATCAGGTCTTTATCCGGAAGTTGTGACGCAAGGACTTGATGCCAAGTTGA
CTCTCTTCACAGAGACTCTGGCAGATTGGCGTGACTACGGTAAGTGTCATTCGATTTATGACCTCATTTGGAAGATTTAC
AACGACCGTTTCTATTATGACTACGTCGGAGGTCTTCCACGAGCTGAGCAACGCCAGGCCAATCTTTATGCCCTTGCCTT
GCGTGCTAATGCTTATGAAAAGACAGGATTTAAGGGGCTTTCTCGTTTTATTGGCATGATTGATAAGATTATTGCCAGCG
GTAATGACCTAGAGGAAGTGACAGATTTGGTTCCCAAAAATGCCGTTAGCCTCATGACCATTCACAAGTCCAAGGGGCTA
GAGTTCAAGTATGTCTTTGTCCTGCAGATGAATCGCAAGTTCATTGGTCACAGCAAGGATGGCCTGAGTGGTAAGTATAT
TATCAATCGTGAAAAAGGGCTTGGTATTAAGTATCTAGCTGACCTCAAAGACCAGATAAACACCAATTTGCCTAAGTTAA
ATGTTGTTCTTGAGACCTTGACCTTCCAGGAAAATCGTAGGGAAGAGCGCAGGGCAAGTATTTCAGAAGAGATGCGTCTA
CTTTATGTGGCAATGACACGTGCAAAGAAGAAACTCTACCTAGTTGGTAAGGGAAGTAAGGAAACCTTAACCCAGCAGTA
TGGCACTGATGTCGAAAATAATCGCCTACCAGTGGCTCTACGTGACCAGATTGCTACTTATCAGGATTGGATTATGGCAC
TTGATACTGCTTTTATGAGAAAGAACCTCAAGTTTACTGTTCGCTTTATTGAGGATGAGGAGTTGACGCCAGAGGCTATT
GGACAGGTTGAAGTCAAGGCAGCAGTAGATGCCGATGATTTATCTAACAATCGTCAGACGGAGGAGATTGAGCGTGCCTT
GACTGTCTTAGAAAGTGTTGAAAAACTCAACCACCTTTATGCACCAGCGATTAACCTACCATCTGTGCGTACCCCAAGCC
AGCTCAAGACCTTTTACGAACCAATTATGGATACAGAGGGCGTAGATATCATGGATAAGAAAGAAGGAGTGCAACCTCTT
GAGACGGCTAGCACTTTTGAGCTACCAGACTTTGGGCAAAAAACTAAGGTCACTGGAGCTGCAGTTGGTTCAGCAACCCA
TGAACTCATGCAACGCTTGACTCTTTCTGATACAGTGACTCTCCAAGATTTGACTCAGGCACTGAGTCGGGTATCGGCAT
CTGATCAAGTCAAGGCGCGTGTTCAGTTAAAAAAACTTTTAGGCTTCTTTGATACAGAGCTCGGGAAGCTTATTTTGGCC
AACCGTGATAAGTTGCGTCGTGAAGCACCTTTTGCCATGTTGGCAGAAGACCCAGCTAGTAAAGAAGACTTTGTTGTTCG
TGGAATCATTGATGGCTATCTTCTTCTTGAAGACCGTATTGTCCTCTTTGACTACAAGACCGACCACTTCACTCGTCCTA
GTGAGCTTAGGACGCGCTACCAAGGGCAAATGAGCCTCTATGCTAAAGCGCTTAGCCAAGCCTATCAAATAGAAAAGGTC
GACAAGTATCTTATCCTCTTAGGTGGAAAAGACTTGGAAGTTGTAGAAATATAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C) (478-894)

• UvrD/REP helicase N-terminal domain (UvrD-helicase) (28-464)

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (1059-1196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexA	Streptococcus pneumoniae R6	50.531	100	0.509