Detailed information NTG1009295

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ABL091_RS16810
• Genome accession: NZ_CP157944
• Coordinates: 3446389..3447552 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain B6
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3441389..3452552

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABL091_RS16780 (ABL091_16760)	-	3441654..3442073 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
ABL091_RS16785 (ABL091_16765)	comFC	3442147..3442836 (-)	690	WP_197538213.1	ComF family protein	Machinery gene
ABL091_RS16790 (ABL091_16770)	-	3442842..3443126 (-)	285	WP_022553866.1	competence protein ComFB	-
ABL091_RS16795 (ABL091_16775)	comFA	3443184..3444569 (-)	1386	WP_022553867.1	DEAD/DEAH box helicase	Machinery gene
ABL091_RS16800 (ABL091_16780)	-	3444677..3445525 (-)	849	WP_003151387.1	DegV family protein	-
ABL091_RS16805 (ABL091_16785)	degU	3445623..3446312 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ABL091_RS16810 (ABL091_16790)	degS	3446389..3447552 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
ABL091_RS16815 (ABL091_16795)	-	3447775..3448422 (+)	648	WP_007407485.1	YigZ family protein	-
ABL091_RS16820 (ABL091_16800)	-	3448427..3449641 (+)	1215	WP_022553868.1	LCP family protein	-
ABL091_RS16825 (ABL091_16805)	-	3449741..3450817 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
ABL091_RS16830 (ABL091_16810)	-	3450949..3452145 (-)	1197	WP_022553869.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1009295 ABL091_RS16810 WP_007407484.1 3446389..3447552(-) (degS) [Bacillus velezensis strain B6]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1009295 ABL091_RS16810 WP_007407484.1 3446389..3447552(-) (degS) [Bacillus velezensis strain B6]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTTAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCTGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951