Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ABI198_RS01610 | Genome accession | NZ_CP157344 |
| Coordinates | 344688..345161 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214061.1 | Uniprot ID | A0A219CC01 |
| Organism | Acinetobacter baumannii strain 2024CK-00537 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 339688..350161
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABI198_RS01585 (ABI198_01585) | - | 340152..342257 (-) | 2106 | WP_001117590.1 | HD domain-containing protein | - |
| ABI198_RS01590 (ABI198_01590) | - | 342297..342426 (-) | 130 | Protein_304 | hypothetical protein | - |
| ABI198_RS01595 (ABI198_01595) | rpoZ | 342465..342743 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ABI198_RS01600 (ABI198_01600) | gmk | 342816..343445 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| ABI198_RS01605 (ABI198_01605) | ispH | 343568..344518 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ABI198_RS01610 (ABI198_01610) | fimU | 344688..345161 (+) | 474 | WP_001214061.1 | GspH/FimT family pseudopilin | Machinery gene |
| ABI198_RS01615 (ABI198_01615) | pilV | 345155..345715 (+) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| ABI198_RS01620 (ABI198_01620) | pilW | 345716..346717 (+) | 1002 | WP_000079200.1 | PilW family protein | Machinery gene |
| ABI198_RS01625 (ABI198_01625) | pilX | 346714..347532 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ABI198_RS01630 (ABI198_01630) | - | 347544..347942 (+) | 399 | Protein_312 | VWA domain-containing protein | - |
| ABI198_RS01640 (ABI198_01640) | - | 349139..349969 (+) | 831 | WP_000854009.1 | OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-235 | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16836.40 Da Isoelectric Point: 8.5355
>NTDB_id=1006062 ABI198_RS01610 WP_001214061.1 344688..345161(+) (fimU) [Acinetobacter baumannii strain 2024CK-00537]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
Nucleotide
Download Length: 474 bp
>NTDB_id=1006062 ABI198_RS01610 WP_001214061.1 344688..345161(+) (fimU) [Acinetobacter baumannii strain 2024CK-00537]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
98.726 |
100 |
0.987 |