Detailed information NTG1004796

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: FGK95_RS00850
• Genome accession: NZ_LR590625
• Coordinates: 141312..141740 (+)
• Length: 142 a.a.
• NCBI ID: WP_039994748.1
• Uniprot ID: -
• Organism: Streptococcus canis strain B700072
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 136312..146740

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGK95_RS00830 (SAMEA5186854_00169)	-	138648..139013 (+)	366	WP_003046179.1	DUF1033 family protein	-
FGK95_RS00835 (SAMEA5186854_00170)	comGA	139100..140041 (+)	942	WP_003046182.1	competence type IV pilus ATPase ComGA	Machinery gene
FGK95_RS00840 (SAMEA5186854_00171)	comGB	139974..141008 (+)	1035	WP_223824829.1	competence type IV pilus assembly protein ComGB	Machinery gene
FGK95_RS00845 (SAMEA5186854_00172)	comGC/cglC	141011..141337 (+)	327	WP_003046186.1	competence type IV pilus major pilin ComGC	Machinery gene
FGK95_RS00850 (SAMEA5186854_00173)	comGD	141312..141740 (+)	429	WP_039994748.1	competence type IV pilus minor pilin ComGD	Machinery gene
FGK95_RS00855 (SAMEA5186854_00174)	comGE	141718..141993 (+)	276	WP_003046190.1	competence type IV pilus minor pilin ComGE	Machinery gene
FGK95_RS00860 (SAMEA5186854_00175)	comGF	141974..142414 (+)	441	WP_003046192.1	competence type IV pilus minor pilin ComGF	Machinery gene
FGK95_RS00865 (SAMEA5186854_00176)	comGG	142392..142772 (+)	381	WP_003046193.1	competence type IV pilus minor pilin ComGG	-
FGK95_RS00870 (SAMEA5186854_00177)	comGH	142822..143775 (+)	954	WP_003046195.1	class I SAM-dependent methyltransferase	Machinery gene
FGK95_RS00875 (SAMEA5186854_00178)	-	143834..145030 (+)	1197	WP_093998734.1	acetate kinase	-
FGK95_RS00880 (SAMEA5186854_00179)	-	145322..145528 (+)	207	WP_003046200.1	helix-turn-helix transcriptional regulator	-
FGK95_RS10705 (SAMEA5186854_00180)	-	145686..146123 (+)	438	WP_138114014.1	hypothetical protein	-

Sequence

Protein

• Length: 142 a.a.
• Molecular weight: 16488.11 Da
• Isoelectric Point: 10.3654

>NTDB_id=1004796 FGK95_RS00850 WP_039994748.1 141312..141740(+) (comGD) [Streptococcus canis strain B700072]
MKKPVLMIKAFTLLETLLSLSVMSFIVLGLSFPVTSSYRRVQEHLFFTRFEHLYRHQQKVAILQQEKRVLTISSKEIRTE
DEGLKVPDSIRVKSSRQLVLDHMGGNHSLTKLTFETGEQRLSYQFYLGSGNYQKTSERLHSP

Nucleotide

• Length: 429 bp

>NTDB_id=1004796 FGK95_RS00850 WP_039994748.1 141312..141740(+) (comGD) [Streptococcus canis strain B700072]
ATGAAAAAGCCAGTCTTAATGATTAAAGCTTTTACGCTACTTGAAACTTTACTGAGTCTGTCAGTGATGAGCTTTATCGT
ACTGGGCTTATCTTTTCCAGTGACAAGTAGTTATCGGAGAGTTCAAGAGCATTTATTTTTCACCCGTTTTGAGCACCTTT
ACCGGCATCAGCAAAAGGTGGCCATTTTACAGCAAGAAAAACGGGTTCTAACGATTTCTTCTAAAGAAATTAGGACAGAA
GATGAGGGCTTAAAAGTACCTGATTCGATAAGGGTTAAAAGTAGTCGCCAGCTAGTCCTTGATCACATGGGAGGCAATCA
TTCGTTGACCAAGTTAACTTTTGAGACAGGGGAACAACGTCTCAGCTACCAATTTTATCTGGGGAGTGGAAATTATCAAA
AAACAAGTGAAAGGTTACATAGCCCTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus gordonii str. Challis substr. CH1	43.939	92.958	0.408
comGD	Streptococcus mutans UA140	44.186	90.845	0.401
comGD	Streptococcus mutans UA159	44.186	90.845	0.401
comGD/cglD	Streptococcus mitis NCTC 12261	42.222	95.07	0.401
comGD/cglD	Streptococcus mitis SK321	41.985	92.254	0.387
comGD/cglD	Streptococcus pneumoniae Rx1	41.221	92.254	0.38
comGD/cglD	Streptococcus pneumoniae D39	41.221	92.254	0.38
comGD/cglD	Streptococcus pneumoniae R6	41.221	92.254	0.38
comGD/cglD	Streptococcus pneumoniae TIGR4	40.458	92.254	0.373