Detailed information NTG1002535

Bioinformatically predicted

Overview

• Name: pilA2
• Type: Machinery gene
• Locus tag: ABFT82_RS21785
• Genome accession: NZ_CP156749
• Coordinates: 4399927..4400361 (+)
• Length: 144 a.a.
• NCBI ID: WP_347505901.1
• Uniprot ID: -
• Organism: Pseudomonas anguilliseptica strain SICAU PA001 isolate largemouth bass
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4394927..4405361

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFT82_RS21760 (ABFT82_21760)	yacG	4394946..4395146 (-)	201	WP_090381707.1	DNA gyrase inhibitor YacG	-
ABFT82_RS21765 (ABFT82_21765)	coaE	4395143..4395757 (-)	615	WP_090381713.1	dephospho-CoA kinase	-
ABFT82_RS21770 (ABFT82_21770)	pilD	4395908..4396777 (-)	870	WP_347505897.1	A24 family peptidase	Machinery gene
ABFT82_RS21775 (ABFT82_21775)	pilC	4396781..4397998 (-)	1218	WP_347505898.1	type II secretion system F family protein	Machinery gene
ABFT82_RS21780 (ABFT82_21780)	pilB	4398002..4399705 (-)	1704	WP_347505899.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ABFT82_RS21785 (ABFT82_21785)	pilA2	4399927..4400361 (+)	435	WP_347505901.1	pilin	Machinery gene
ABFT82_RS21790 (ABFT82_21790)	-	4400417..4402348 (+)	1932	WP_347505902.1	tetratricopeptide repeat protein	-
ABFT82_RS21795 (ABFT82_21795)	-	4402345..4403193 (+)	849	WP_090381748.1	glycosyltransferase family 2 protein	-
ABFT82_RS21800 (ABFT82_21800)	-	4403194..4404363 (+)	1170	WP_347505903.1	DegT/DnrJ/EryC1/StrS family aminotransferase	-
ABFT82_RS21805 (ABFT82_21805)	-	4404530..4405135 (+)	606	WP_347505904.1	acyltransferase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 14803.16 Da
• Isoelectric Point: 9.9836

>NTDB_id=1002535 ABFT82_RS21785 WP_347505901.1 4399927..4400361(+) (pilA2) [Pseudomonas anguilliseptica strain SICAU PA001 isolate largemouth bass]
MKAQMQKGFTLIELMIVVAIIGILAAVALPAYQDYTKRSHVSEGLSLASGAKTTVTEYFSSIGAFPDSNALAGLAPAASI
NGNAVTSVAVGAKGMITITYNAKVASDSTLVLSPFTAAGSVKWTCKAGATKPVDAKFRPSNCRT

Nucleotide

• Length: 435 bp

>NTDB_id=1002535 ABFT82_RS21785 WP_347505901.1 4399927..4400361(+) (pilA2) [Pseudomonas anguilliseptica strain SICAU PA001 isolate largemouth bass]
ATGAAAGCTCAAATGCAAAAAGGCTTTACCCTGATCGAATTGATGATTGTGGTTGCGATCATCGGTATTCTGGCGGCTGT
TGCGCTGCCGGCTTATCAGGATTACACCAAGCGTTCCCATGTCTCCGAGGGCTTGAGTCTGGCGTCTGGCGCAAAAACCA
CGGTTACTGAGTACTTTTCGTCTATCGGGGCTTTCCCTGACAGCAACGCCTTGGCAGGCCTTGCCCCTGCGGCGTCCATT
AACGGTAACGCAGTTACGTCGGTAGCAGTTGGTGCGAAAGGTATGATCACTATCACCTACAATGCGAAGGTAGCAAGCGA
CAGTACCTTGGTTCTCAGTCCCTTCACTGCAGCGGGGTCGGTTAAGTGGACCTGTAAGGCCGGCGCCACTAAACCGGTTG
ATGCTAAGTTCCGTCCTTCGAACTGCCGCACCTAA

Domains

Predicted by InterproScan.

• Pilin (bacterial filament) (Pilin) (38-143)

• Prokaryotic N-terminal methylation motif (N_methyl) (6-29)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA2	Legionella pneumophila str. Paris	55	97.222	0.535
pilA2	Legionella pneumophila strain ERS1305867	54.286	97.222	0.528
pilE	Neisseria gonorrhoeae strain FA1090	48.077	100	0.521
pilE	Neisseria gonorrhoeae MS11	46.203	100	0.507
pilA	Ralstonia pseudosolanacearum GMI1000	40.351	100	0.479
comP	Acinetobacter baylyi ADP1	44.898	100	0.458
pilA	Vibrio campbellii strain DS40M4	41.06	100	0.431
pilA/pilA1	Eikenella corrodens VA1	40.523	100	0.431
pilA/pilAI	Pseudomonas stutzeri DSM 10701	40.94	100	0.424
pilA	Vibrio cholerae C6706	39.597	100	0.41
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	39.597	100	0.41
pilA	Vibrio cholerae strain A1552	39.597	100	0.41
pilA/pilAII	Pseudomonas stutzeri DSM 10701	39.041	100	0.396
pilA	Acinetobacter baumannii strain A118	38.732	98.611	0.382