Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   EL070_RS02285 Genome accession   NZ_LR134284
Coordinates   431695..432729 (+) Length   344 a.a.
NCBI ID   WP_023079963.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8232     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 426695..437729
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL070_RS02255 (NCTC8232_00443) tsaE 427793..428254 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL070_RS02260 (NCTC8232_00444) - 428229..428753 (+) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  EL070_RS02265 (NCTC8232_00445) brpA 428762..430012 (+) 1251 WP_111705755.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL070_RS02270 (NCTC8232_00446) - 430123..430479 (-) 357 WP_002988657.1 hypothetical protein -
  EL070_RS02275 (NCTC8232_00447) - 430476..430895 (-) 420 WP_002983376.1 HIT family protein -
  EL070_RS02280 (NCTC8232_00448) pptA 430967..431692 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  EL070_RS02285 (NCTC8232_00449) pptB 431695..432729 (+) 1035 WP_023079963.1 ABC transporter permease Regulator
  EL070_RS02290 (NCTC8232_00450) ccrZ 432793..433584 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  EL070_RS02295 (NCTC8232_00451) trmB 433584..434219 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EL070_RS02305 (NCTC8232_00453) - 434417..435496 (-) 1080 WP_002983389.1 site-specific integrase -
  EL070_RS02310 (NCTC8232_00454) - 435617..436474 (-) 858 WP_111680774.1 DNA adenine methylase -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40189.41 Da        Isoelectric Point: 10.2801

>NTDB_id=1000016 EL070_RS02285 WP_023079963.1 431695..432729(+) (pptB) [Streptococcus pyogenes strain NCTC8232]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRCLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=1000016 EL070_RS02285 WP_023079963.1 431695..432729(+) (pptB) [Streptococcus pyogenes strain NCTC8232]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTAATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGATGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTCTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment