ICEberg
I. Information of ICE
ICEberg ID334
Name ICEAdeK601-1 This is a putative ICE identified in this study by Blast
OrganismAlicycliphilus denitrificans K601
Size (bp)51736
GC content [Genome] (%)65.27
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP002657 (complete ICE sequence in this genome)
Replicon[NC_015422]
Genome coordinates1657600..1709335 
Putative oriT region -
Putative relaxase coordinates: 1681968..1683965; Locus tag: Alide2_1585;  Family:  MOBL


II. ICE interaction with IME/CIME/

The interaction information of ICEAdeK601-1 is not available.



The graph information of ICEAdeK601-1 components from CP002657
Complete gene list of ICEAdeK601-1 from CP002657
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1Alide2_15561653251..1654213 [-], 963transposase IS4 family protein
2Alide2_15571654411..1655379 [-], 969transposase IS4 family protein
3Alide2_15591655594..1655929 [+], 336hypothetical protein
4Alide2_15601655898..1656842 [-], 945Integrase catalytic region
5Alide2_15621657385..1657603 [-], 219Protein of unknown function DUF2274
6Alide2_15631657600..1658886 [-], 1287conjugation TrbI family proteinTrbI, T4SS component 
7Alide2_15641658889..1659872 [-], 984P-type conjugative transfer protein TrbGTrbG, T4SS component 
8Alide2_15651659869..1660573 [-], 705conjugal transfer protein TrbFTrbF, T4SS component 
9Alide2_15661660586..1661971 [-], 1386P-type conjugative transfer protein TrbLTrbL, T4SS component 
10Alide2_15671661968..1662288 [-], 321putative lipoproteinTrbJ, T4SS component 
11Alide2_15681662301..1663026 [-], 726P-type conjugative transfer protein TrbJTrbJ, T4SS component 
12Alide2_15691663023..1665476 [-], 2454CagE, TrbE, VirB component of type IV transporter system, conserved regionTrbE, T4SS component 
13Alide2_15701665492..1665764 [-], 273conjugal transfer proteinTrbD, T4SS component 
14Alide2_15711665761..1666144 [-], 384Conjugal transfer protein TrbCTrbC, T4SS component 
15Alide2_15721666141..1667193 [-], 1053P-type conjugative transfer ATPase TrbBTrbB, T4SS component 
16Alide2_15731667190..1667654 [-], 465CopG-like domain-containing protein DNA-binding protein
17Alide2_15741667651..1669651 [-], 2001TRAG family proteinVirD4, T4SS component 
18Alide2_15751669887..1670165 [-], 279putative lipoprotein
19Alide2_15761670162..1671106 [-], 945transcriptional regulator, LysR family
20Alide2_15771671209..1672462 [-], 1254monooxygenase FAD-binding protein
21Alide2_15781672473..1673990 [-], 1518RND efflux system, outer membrane lipoprotein, NodT family
22Alide2_15791674003..1675118 [-], 1116ABC-2 type transporter
23Alide2_15801675124..1676266 [-], 1143ABC-2 type transporter
24Alide2_15811676263..1678041 [-], 1779Sulfate-transporting ATPase, Polyamine-transporting ATPase
25Alide2_15821678038..1679036 [-], 999secretion protein HlyD family protein
26Alide2_15831679163..1679855 [+], 693Transcriptional regulator TetR
27Alide2_15841679860..1681881 [+], 2022hypothetical protein
28Alide2_15851681968..1683965 [-], 1998hypothetical proteinRelaxase, MOBL Family
29Alide2_15861683962..1684417 [-], 456hypothetical protein
30Alide2_15871684414..1685001 [-], 588Peptidase S26, conserved regionTraF, T4SS component 
31Alide2_15881684998..1685543 [-], 546hypothetical protein
32Alide2_15891685540..1685824 [-], 285hypothetical protein
33Alide2_15901685821..1686459 [-], 639Cobyrinic acid ac-diamide synthase
34Alide2_15911686713..1687570 [-], 858Replication initiator protein A
35Alide2_15921687597..1687878 [-], 282hypothetical protein
36Alide2_15931687963..1688736 [-], 774Protein of unknown function DUF2285
37Alide2_15941689046..1689549 [-], 504hypothetical protein
38Alide2_15951689637..1689942 [+], 306helix-turn-helix domain protein
39Alide2_15961690006..1690359 [-], 354protein of unknown function DUF736TraF, T4SS component 
40Alide2_15971691106..1691435 [+], 330regulatory protein ArsR
41Alide2_15981691449..1691919 [+], 471Glyoxalase/bleomycin resistance protein/dioxygenase
42Alide2_15991691932..1692429 [+], 498protein tyrosine phosphatase
43Alide2_16001692440..1693525 [+], 1086arsenical-resistance protein
44Alide2_16011693543..1693965 [+], 423arsenate reductase
45Alide2_16021694064..1694366 [+], 303transcriptional regulator, PadR-like family
46Alide2_16031694363..1695592 [+], 1230chromate transporter, chromate ion transporter (CHR) family
47Alide2_16041695598..1696128 [+], 531GCN5-related N-acetyltransferase
48Alide2_16051696336..1698387 [-], 2052ParB domain protein nuclease
49Alide2_16061698465..1699289 [-], 825protein of unknown function DUF932
50Alide2_16071699816..1700484 [+], 669hypothetical protein
51Alide2_16081700515..1700865 [-], 351hypothetical protein
52Alide2_16091701147..1701653 [-], 507DNA repair protein RadC
53Alide2_16101702066..1703208 [+], 1143hypothetical protein
54Alide2_16111703212..1703799 [+], 588hypothetical protein
55Alide2_16121703841..1704326 [+], 486Domain of unknown function DUF1863
56Alide2_16131704343..1705005 [-], 663Uracil-DNA glycosylase superfamily
57Alide2_16141705002..1706138 [-], 1137hypothetical protein
58Alide2_16151706142..1706768 [-], 627hypothetical protein
59Alide2_16161706768..1707235 [-], 468Domain of unknown function DUF1863
60Alide2_16171707324..1707626 [-], 303transcriptional regulator, XRE family
61Alide2_16181707610..1707993 [-], 384hypothetical protein
62Alide2_16191708133..1709335 [-], 1203integrase family proteinIntegrase 
63Alide2_16201709584..1710213 [+], 630hypothetical protein
64Alide2_16211710338..1712296 [+], 1959excinuclease ABC, C subunit
65Alide2_16221712326..1712913 [+], 588CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase
66Alide2_16231713258..1713530 [+], 273histone family protein DNA-binding protein
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins57Fasta
Identified as part of this study from CP002657

Genomics & Bioinformatics Group in MML, SJTU