ICEberg

ICE
Gene list
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References

I. Information of ICE

ICEberg ID	224
Name	Tn5801
ICEO ID	ICEO_0000162
Organism	Staphylococcus aureus subsp. aureus Mu50
Size (bp)	25618
GC content [Genome] (%)	35.39[32.88]
Insertion site	GMP-synthase gene (SAV0391)
Function	Tetracycline resistance
Species that ICE can be transferred to	-
Nucleotide Sequence	BA000017 (complete ICE sequence in this genome)
Replicon	chromosome (2878529 bp, BioProject:263) [NC_002758]
Genome coordinates	436064..461681
Putative oriT region	-
Putative relaxase	-

II. ICE interaction with IME/CIME/

The interaction information of Tn5801 is not available.

The graph information of Tn5801 components from BA000017

Complete gene list of Tn5801 from BA000017
#	Gene	Coordinates [+/-], size (bp)	Product (GenBank annotation)	*Reannotation
1	xprT	431087..431665 [+], 579	xanthine phosphoribosyltransferase
2	pbuX	431665..432933 [+], 1269	xanthine permease
3	guaB	432971..434437 [+], 1467	inositol-monophosphate dehydrogenase
4	guaA	434462..436003 [+], 1542	GMP synthase
5	int	436071..437264 [-], 1194	integrase homolog	Integrase
6	SAV0393	437291..437491 [-], 201	hypothetical protein
7	SAV0394	437989..438219 [-], 231	conserved hypothetical protein
8	SAV0395	438216..438698 [-], 483	hypothetical protein
9	SAV0396	438827..438937 [-], 111	hypothetical protein
10	SAV0397	439169..439522 [+], 354	putative transcriptional regulator
11	tetM	439865..441784 [-], 1920	tetracycline resistance protein
12	SAV0399	442161..443123 [-], 963	hypothetical protein	Orf13_Tn, T4SS component
13	SAV0400	443107..444129 [-], 1023	similar to lipoprotein, NLP/P60 family	Orf14_Tn, T4SS component
14	SAV0401	444126..446153 [-], 2028	putative membrane protein	Orf15_Tn, T4SS component
15	SAV0402	446150..448603 [-], 2454	hypothetical protein	Orf16_Tn, T4SS component
16	SAV0403	448587..449024 [-], 438	hypothetical protein	Orf17_Tn, T4SS component
17	SAV0404	449054..449692 [-], 639	hypothetical protein
18	SAV0405	449748..450248 [-], 501	hypothetical protein
19	SAV0406	450309..451088 [-], 780	hypothetical protein
20	SAV0407	451130..451351 [-], 222	hypothetical protein	Orf19_Tn, T4SS component
21	SAV0408	451634..452818 [-], 1185	putative phage replication protein
22	SAV0409	453000..454403 [-], 1404	similar to DNA translocase FtsK	Orf21_Tn, T4SS component
23	SAV0410	454425..455198 [-], 774	hypothetical protein
24	SAV0411	455208..455585 [-], 378	hypothetical protein
25	SAV0412	455606..455920 [-], 315	hypothetical protein
26	SAV0413	456120..457913 [-], 1794	hypothetical protein
27	SAV0414	457910..460099 [-], 2190	hypothetical protein
28	tnp	460233..461423 [-], 1191	transposase
29	SAV0416	461917..462453 [-], 537	hypothetical protein
30	SAV0417	462845..463549 [-], 705	hypothetical protein
31	SAV0418	463948..464244 [-], 297	probable transposase
32	SAV0419	464481..464633 [-], 153	hypothetical protein
33	SAV0420	465165..465524 [-], 360	conserved hypothetical protein
34	SAV0421	465543..466388 [-], 846	putative nucleoside-diphosphate-sugar epimerase

Flanking regions

Element	No. of sequences	Download
Nucleotide sequences	1	Fasta
Proteins	24	Fasta

(1) Denapaite D; Bruckner R; Nuhn M; Reichmann P; Henrich B; Maurer P; Schahle Y; Selbmann P; Zimmermann W; Wambutt R; Hakenbeck R (2010). The genome of Streptococcus mitis B6--what is a commensal. PLoS One. 5(2):e9426. [PubMed:20195536]

(2) Kuroda M; Ohta T; Uchiyama I; Baba T; Yuzawa H; Kobayashi I; Cui L; Oguchi A; Aoki K; Nagai Y; Lian J; Ito T; Kanamori M; Matsumaru H; Maruyama A; Murakami H; Hosoyama A; Mizutani-Ui Y; Takahashi NK; Sawano T; Inoue R; Kaito C; Sekimizu K; Hirakawa H; Kuhara S; Goto S; Yabuzaki J; Kanehisa M; Yamashita A; Oshima K; Furuya K; Yoshino C; Shiba T; Hattori M; Ogasawara N; Hayashi H; Hiramatsu K (2001). Whole genome sequencing of meticillin-resistant Staphylococcus aureus. Lancet. 357(9264):1225-40. [PubMed:11418146]